| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527927
Identifier: 188527927
GI number: 188527927
Start: 1159918
End: 1160013
Strand: Reverse
Name: 188527927
Synonym: HPSH_05900
Alternate gene names: NA
Gene position: 1160013-1159918 (Counterclockwise)
Preceding gene: 188527929
Following gene: 188527925
Centisome position: 72.12
GC content: 25.0
Gene sequence:
>96_bases TTGCTTAGTTTTGAAGGATTGGGCTTATTCTTTCTTTTGTTTAATTTGTTATCTTCTTTGTTTTATTGGATTTATTTGGT TTTAATGTTTGTTTGA
Upstream 100 bases:
>100_bases CGTAGGTGAACCTGCGGTTGGATCACCTCCTTTCTAGAGAAAAGCTTTTAATATTCGCTTATTGAAAGCCAAGAGTATTA CCTGACAAAAGAACTTCTTG
Downstream 100 bases:
>100_bases TTTTTTGTGTTGATTTTGCTTCGTGTGCTTAATTGGTCTTGACTGATTTTTGTTTGACTTAAATCTTATTTTTTTCATTC TTGTGCTTTGGTTGTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 31; Mature: 31
Protein sequence:
>31_residues MLSFEGLGLFFLLFNLLSSLFYWIYLVLMFV
Sequences:
>Translated_31_residues MLSFEGLGLFFLLFNLLSSLFYWIYLVLMFV >Mature_31_residues MLSFEGLGLFFLLFNLLSSLFYWIYLVLMFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3738; Mature: 3738
Theoretical pI: Translated: 3.85; Mature: 3.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSFEGLGLFFLLFNLLSSLFYWIYLVLMFV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLSFEGLGLFFLLFNLLSSLFYWIYLVLMFV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA