Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527926

Identifier: 188527926

GI number: 188527926

Start: 1159424

End: 1159531

Strand: Direct

Name: 188527926

Synonym: HPSH_05895

Alternate gene names: NA

Gene position: 1159424-1159531 (Clockwise)

Preceding gene: 188527904

Following gene: 188527928

Centisome position: 72.08

GC content: 35.19

Gene sequence:

>108_bases
TTGAGTTATTGCATTGATTTTCAAGCGCGCAATTTTGAACGCCAACCACTTGTTCAACTAGATCCCAAAGAAATTAAAAC
CCAAATCCTTGAGCATTTAAAACTCTAA

Upstream 100 bases:

>100_bases
TTATTAAAACCCTACAGCGCATTTATTGCGCTTTCTTGCGCTCAATTCCATTATTCAGGCATGCGCCTAGTGGCCCCCTA
TGAAAACGATTCTATGATTT

Downstream 100 bases:

>100_bases
AAATAAGGCTTTAAACACCAATACCTGATAGGAACGGAGTTTTCAAATCCAAACGCATTCAATCATAATCAACCAAAACT
TAAACAAAAGAAATAAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 35; Mature: 34

Protein sequence:

>35_residues
MSYCIDFQARNFERQPLVQLDPKEIKTQILEHLKL

Sequences:

>Translated_35_residues
MSYCIDFQARNFERQPLVQLDPKEIKTQILEHLKL
>Mature_34_residues
SYCIDFQARNFERQPLVQLDPKEIKTQILEHLKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4246; Mature: 4115

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYCIDFQARNFERQPLVQLDPKEIKTQILEHLKL
CCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYCIDFQARNFERQPLVQLDPKEIKTQILEHLKL
CEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA