| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527926
Identifier: 188527926
GI number: 188527926
Start: 1159424
End: 1159531
Strand: Direct
Name: 188527926
Synonym: HPSH_05895
Alternate gene names: NA
Gene position: 1159424-1159531 (Clockwise)
Preceding gene: 188527904
Following gene: 188527928
Centisome position: 72.08
GC content: 35.19
Gene sequence:
>108_bases TTGAGTTATTGCATTGATTTTCAAGCGCGCAATTTTGAACGCCAACCACTTGTTCAACTAGATCCCAAAGAAATTAAAAC CCAAATCCTTGAGCATTTAAAACTCTAA
Upstream 100 bases:
>100_bases TTATTAAAACCCTACAGCGCATTTATTGCGCTTTCTTGCGCTCAATTCCATTATTCAGGCATGCGCCTAGTGGCCCCCTA TGAAAACGATTCTATGATTT
Downstream 100 bases:
>100_bases AAATAAGGCTTTAAACACCAATACCTGATAGGAACGGAGTTTTCAAATCCAAACGCATTCAATCATAATCAACCAAAACT TAAACAAAAGAAATAAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 35; Mature: 34
Protein sequence:
>35_residues MSYCIDFQARNFERQPLVQLDPKEIKTQILEHLKL
Sequences:
>Translated_35_residues MSYCIDFQARNFERQPLVQLDPKEIKTQILEHLKL >Mature_34_residues SYCIDFQARNFERQPLVQLDPKEIKTQILEHLKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4246; Mature: 4115
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYCIDFQARNFERQPLVQLDPKEIKTQILEHLKL CCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SYCIDFQARNFERQPLVQLDPKEIKTQILEHLKL CEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA