Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 188527885

GI number:

Start: 1120791

End: 1121981

Strand: Reverse

Name: Not Available

Synonym: HPSH_05680

Alternate gene names: NA

Gene position: NA

Preceding gene: 188527887

Following gene: 188527884

Centisome position: NA

GC content: NA

Gene sequence:

>1191_bases
ATGACTTCAGATTCAAGCCATTCTTTTAAGGAACAAGATTTTCATATCCCTATCGCTTTTGCTTTTGATAAGAATTATCT
CATTCCTGCGGGCGCGTGCATTTATTCCTTGTTAGAAAGCATCGCTAAAGCCAATAAAAAAATTCGTTACACCCTATACG
CTTTAGTGGTAGGCTTGAATGAAGAAGATAAAGCAAAGCTCCACCAAATCGCAGAGACTTTTAAAGAATTTGTTGCTTTA
GAAGTGAAAGACATTGAACCTTTTTTAGACACTATCCCTAACCCTTTTGATGAGGATTTCACCAAGCGTTTTTCTAAAAT
GGTGTTAGTGAAGTATTTTTTGGCGGATTTGTTCCCCAAATATTCCAAAATGGTGTGGAGCGATGTGGATGTCATCTTTT
GCAATGAATTTAGCGCTGATTTCTTAAACGTTAAAGAAGATGATGAGAATTATTTTTATGGGGTTTTAGAAGTTGAAAAG
CACCACATGATGGAAGGGTTTTTGTTCTGTAATTTAGATTACCAGCGCAAGAAAAATTTCACCTTAAGAATGCATGATCT
TTTAAAGGGGAATGAGACTAAAGAGGAGTTGGATTTTACGAAATGGTGTTGGCCTAACATGAAAACTTTAGGGATTGAGT
ATTGCATTTTCCCTTTCTATTACACCATTAAAGATTTTTCTAACGCGTATTTAAACGAGAATTACAAGAAAACCATTTTA
GAGGCGCTCAAAAACCCTATAATCATCCACTATGACGCTTGGTGGGGGGCGGTGAAGCCTTGGGATTACCCTTTTGGTTT
AAAAGCGGATTTGTGGCTGAACGCTTTGGCTAAAACCCCATTTATGAGCGATTACACTAAAAAAATGCACACCAATGAGA
GCTTTTACACCACAAAAATGGCTCAACAACATTATTTTTCTTCAACAGCGCCTTCAAAAGAAATTCTTTTTAAGGCTCCG
TATTTGTTTTTCAAATCGTATTTGCTTGTTGTGTTTAAAGAAAGGAAAATCCATTCAAGAGTTTTTGGATTAACTTGTGG
TTTGGTGAAAAAATTTTTCAATAAGCTTATTTACTTTGGGTTTTTTATGCCTAAATCGTTAGCTAAAAGGGTGGTTAGTA
AGATCCTTAGAGTTTTAGGGCTTCATGGGATTGTTAAAAAAATCCTACTCAAGCTCTTAAAAAAGAGCTAG

Upstream 100 bases:

>100_bases
AAATTAATTTTCATTAAAAACAACATAAAAACCAAAACAGAACCCTTTCAAGTTTGGTTTTTTTAGATAAAATAGCTTTA
AAAAAGGGCGTTTAATTTTT

Downstream 100 bases:

>100_bases
AGTAAAGGGGTTAAAACCTTTCTTTAATTAATTAATTAATTTTCATTAAAAACAACATAAAAACCAAAACAGAACCCTTT
CAAGTTTGGTTTTTTTAGAT

Product: putative lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>396_residues
MTSDSSHSFKEQDFHIPIAFAFDKNYLIPAGACIYSLLESIAKANKKIRYTLYALVVGLNEEDKAKLHQIAETFKEFVAL
EVKDIEPFLDTIPNPFDEDFTKRFSKMVLVKYFLADLFPKYSKMVWSDVDVIFCNEFSADFLNVKEDDENYFYGVLEVEK
HHMMEGFLFCNLDYQRKKNFTLRMHDLLKGNETKEELDFTKWCWPNMKTLGIEYCIFPFYYTIKDFSNAYLNENYKKTIL
EALKNPIIIHYDAWWGAVKPWDYPFGLKADLWLNALAKTPFMSDYTKKMHTNESFYTTKMAQQHYFSSTAPSKEILFKAP
YLFFKSYLLVVFKERKIHSRVFGLTCGLVKKFFNKLIYFGFFMPKSLAKRVVSKILRVLGLHGIVKKILLKLLKKS

Sequences:
NA

Specific function: NA

COG id: COG1442

COG function: function code M; Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA