| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is guaA
Identifier: 188527826
GI number: 188527826
Start: 1055071
End: 1056597
Strand: Reverse
Name: guaA
Synonym: HPSH_05360
Alternate gene names: 188527826
Gene position: 1056597-1055071 (Counterclockwise)
Preceding gene: 188527827
Following gene: 188527825
Centisome position: 65.69
GC content: 41.19
Gene sequence:
>1527_bases ATGATTTTAGTATTAGATTTTGGGAGCCAATACACACAGCTGATTGCTAGAAGATTGAGAGAGAGCGGGATTTATGCAGA AATAGTCCCTTTTTTTGAAAGCATAGAAAACATTCAAAAAAAAGCCCCTAAAGGTTTGATTTTGAGTGGGGGGCCAGCGA GCGTGTATGCTAAAGACGCTTACAAGCCTAGCAAGAAAATCTTTGATTTGGATTTGCCGATTTTAGGGATTTGCTACGGC ATGCAGTATTTAGTGGATTTTTTTGGGGGGGTAGTGGCTTGCACGAATGAGCAAGAATTTGGTAAGGCTATCTTAGAAAT CACTCAAGATTCTGTGATTTTTGAAGGCGTGAAAATTAAAAGCCTTGTGTGGATGAGTCATATGGATAAAGTCATAGAAT TGCCTAAAGGCTTCACTACCCTTGCAAAAAGCCCTAATTCCCCCCATTGCGCGATTGAAAACGCTAAGATTTTTGGCTTG CAATTCCACCCAGAAGTCATTCAAAGCGAAGAAGGGGGTAAGATTTTAGAAAATTTTGCCCTTTTGGTTTGCGGCTGTGA AAAAACTTGGGGGATGCAGCATTTCGCTCAAAAAGAAATGGCACGATTGAAAGAAAAAATTGCTAACGCTAAGGTTTTGT GCGCGGTGAGTGGGGGCGTGGATTCTACGGTGGTCGCTACGCTATTGCACAGAGCCATTAAGGATAATTTGATCGCTGTT TTTGTAGATCATGGCTTGTTGCGTAAAAATGAAAAAGAAAAAGTTCAAGCGATGTTTAAAGACTTGCAAATCCCTTTAAA CACGATAGACGCTAAAGAAATCTTTTTGTCTAAATTAAAGGGCGTGAGCGAGCCTGAATTGAAGCGAAAAATCATCGGCG AAACCTTTATTGAAGCGTTTGAAAAAGAAGCCAAGAAGCACCATTTGAAAGGCAAAATTGAGTTTTTAGCCCAAGGCACT TTATACCCTGATGTGATTGAATCCGTGAGCGTTAAAGGGCCTTCAAAAGTGATCAAAACCCACCATAATGTGGGCGGATT GCCTGAATGGATGGACTTTAAACTCATAGAGCCTTTAAGGGAATTGTTTAAAGATGAGGTCCGTTTGTTGGGTAAGGAAT TGGGCATTAGCCAGGATTTTTTAATGCGCCACCCCTTTCCAGGGCCTGGACTTGCGATAAGGATTTTAGGCGAAGTCAGC GAGAGTAAGATCAGATGCTTGCAAGAAGCGGATTTTATTTTTATAGAAGAGCTTAAAAAAGCCAATTTGTATGACAAGGT TTGGCAGGCTTTTTGCGTGCTGTTGAATGTCAATTCTGTGGGGGTTATGGGGGATAATCGCACTTATGAAAACGCTATTT GTTTAAGGGCGGTGAATGCGAGCGATGGCATGACAGCGAGCTTTTCATTTTTGGAGCATTCTTTTTTAGAAAAGGTTTCT AATCGCATCACTAATGAAGTGAGCGGTATCAATAGGGTGGTGTATGATATTACCTCTAAACCACCAGGAACGATTGAATG GGAATGA
Upstream 100 bases:
>100_bases TGGTTTGTGCAAAAAGCGCCCGCGTTGGCTGAAAGCTATAGGGTGAATTATAAGAATCAATACAATAAAACACAGACCCC ACAAAAATAAAGAATGAGCG
Downstream 100 bases:
>100_bases TTATCCGTAAAAATAGAGATAAAAAGTGGGATTTTTTGGGTAAGATTAGAAATTGATTTTAAAGAAAAAGAAAGAAAGGA ATTTAATGAAAAAAGGTAGT
Product: GMP synthase
Products: NA
Alternate protein names: GMP synthetase; Glutamine amidotransferase [H]
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDAYKPSKKIFDLDLPILGICYG MQYLVDFFGGVVACTNEQEFGKAILEITQDSVIFEGVKIKSLVWMSHMDKVIELPKGFTTLAKSPNSPHCAIENAKIFGL QFHPEVIQSEEGGKILENFALLVCGCEKTWGMQHFAQKEMARLKEKIANAKVLCAVSGGVDSTVVATLLHRAIKDNLIAV FVDHGLLRKNEKEKVQAMFKDLQIPLNTIDAKEIFLSKLKGVSEPELKRKIIGETFIEAFEKEAKKHHLKGKIEFLAQGT LYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELGISQDFLMRHPFPGPGLAIRILGEVS ESKIRCLQEADFIFIEELKKANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVS NRITNEVSGINRVVYDITSKPPGTIEWE
Sequences:
>Translated_508_residues MILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDAYKPSKKIFDLDLPILGICYG MQYLVDFFGGVVACTNEQEFGKAILEITQDSVIFEGVKIKSLVWMSHMDKVIELPKGFTTLAKSPNSPHCAIENAKIFGL QFHPEVIQSEEGGKILENFALLVCGCEKTWGMQHFAQKEMARLKEKIANAKVLCAVSGGVDSTVVATLLHRAIKDNLIAV FVDHGLLRKNEKEKVQAMFKDLQIPLNTIDAKEIFLSKLKGVSEPELKRKIIGETFIEAFEKEAKKHHLKGKIEFLAQGT LYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELGISQDFLMRHPFPGPGLAIRILGEVS ESKIRCLQEADFIFIEELKKANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVS NRITNEVSGINRVVYDITSKPPGTIEWE >Mature_508_residues MILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDAYKPSKKIFDLDLPILGICYG MQYLVDFFGGVVACTNEQEFGKAILEITQDSVIFEGVKIKSLVWMSHMDKVIELPKGFTTLAKSPNSPHCAIENAKIFGL QFHPEVIQSEEGGKILENFALLVCGCEKTWGMQHFAQKEMARLKEKIANAKVLCAVSGGVDSTVVATLLHRAIKDNLIAV FVDHGLLRKNEKEKVQAMFKDLQIPLNTIDAKEIFLSKLKGVSEPELKRKIIGETFIEAFEKEAKKHHLKGKIEFLAQGT LYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELGISQDFLMRHPFPGPGLAIRILGEVS ESKIRCLQEADFIFIEELKKANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVS NRITNEVSGINRVVYDITSKPPGTIEWE
Specific function: Catalyzes the synthesis of GMP from XMP [H]
COG id: COG0519
COG function: function code F; GMP synthase, PP-ATPase domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GMP-binding domain [H]
Homologues:
Organism=Homo sapiens, GI4504035, Length=545, Percent_Identity=35.2293577981651, Blast_Score=293, Evalue=3e-79, Organism=Escherichia coli, GI1788854, Length=519, Percent_Identity=50.6743737957611, Blast_Score=510, Evalue=1e-146, Organism=Escherichia coli, GI1787517, Length=181, Percent_Identity=29.8342541436464, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71992717, Length=566, Percent_Identity=33.5689045936396, Blast_Score=272, Evalue=3e-73, Organism=Caenorhabditis elegans, GI133901714, Length=566, Percent_Identity=33.5689045936396, Blast_Score=272, Evalue=4e-73, Organism=Caenorhabditis elegans, GI71992710, Length=566, Percent_Identity=33.5689045936396, Blast_Score=271, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6323873, Length=514, Percent_Identity=56.420233463035, Blast_Score=555, Evalue=1e-159, Organism=Drosophila melanogaster, GI281365319, Length=546, Percent_Identity=35.1648351648352, Blast_Score=270, Evalue=2e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR001674 - InterPro: IPR004739 - InterPro: IPR022955 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF00117 GATase; PF00958 GMP_synt_C; PF02540 NAD_synthase [H]
EC number: =6.3.5.2 [H]
Molecular weight: Translated: 56840; Mature: 56840
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDA CEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCC YKPSKKIFDLDLPILGICYGMQYLVDFFGGVVACTNEQEFGKAILEITQDSVIFEGVKIK CCCCCCEEECCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCHHHCCCCHHH SLVWMSHMDKVIELPKGFTTLAKSPNSPHCAIENAKIFGLQFHPEVIQSEEGGKILENFA HHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEECCCEEEEEEECHHHHCCCCCCHHHHHHE LLVCGCEKTWGMQHFAQKEMARLKEKIANAKVLCAVSGGVDSTVVATLLHRAIKDNLIAV EEEECCCHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEE FVDHGLLRKNEKEKVQAMFKDLQIPLNTIDAKEIFLSKLKGVSEPELKRKIIGETFIEAF EECCHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EKEAKKHHLKGKIEFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLR HHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH ELFKDEVRLLGKELGISQDFLMRHPFPGPGLAIRILGEVSESKIRCLQEADFIFIEELKK HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHH ANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVS CCHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH NRITNEVSGINRVVYDITSKPPGTIEWE HHHHHHHHHHHHEEEEECCCCCCCCCCC >Mature Secondary Structure MILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDA CEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCC YKPSKKIFDLDLPILGICYGMQYLVDFFGGVVACTNEQEFGKAILEITQDSVIFEGVKIK CCCCCCEEECCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCHHHCCCCHHH SLVWMSHMDKVIELPKGFTTLAKSPNSPHCAIENAKIFGLQFHPEVIQSEEGGKILENFA HHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEECCCEEEEEEECHHHHCCCCCCHHHHHHE LLVCGCEKTWGMQHFAQKEMARLKEKIANAKVLCAVSGGVDSTVVATLLHRAIKDNLIAV EEEECCCHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEE FVDHGLLRKNEKEKVQAMFKDLQIPLNTIDAKEIFLSKLKGVSEPELKRKIIGETFIEAF EECCHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EKEAKKHHLKGKIEFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLR HHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH ELFKDEVRLLGKELGISQDFLMRHPFPGPGLAIRILGEVSESKIRCLQEADFIFIEELKK HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHH ANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVS CCHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH NRITNEVSGINRVVYDITSKPPGTIEWE HHHHHHHHHHHHEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA