| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527806
Identifier: 188527806
GI number: 188527806
Start: 1029367
End: 1029702
Strand: Reverse
Name: 188527806
Synonym: HPSH_05230
Alternate gene names: NA
Gene position: 1029702-1029367 (Counterclockwise)
Preceding gene: 188527807
Following gene: 188527805
Centisome position: 64.01
GC content: 32.44
Gene sequence:
>336_bases ATGAAACTGCCTAAAGATTTTGAAGATTATTGTGAAGCGTATGGGAATTTCAATGAAAATGGGCTAGAAATTTTTGGCAC TCTAAAAAGTCAAGCGACCGATAAATTACCCGCTTTTCAAGCGGCCACTAAACTCTATTCACAACATTATGATTTAGAAG AAAATGAGATTGTAATTTATTATGATGATTATTTAAATGCTGTTGTTGTTCTCAATGAAGAGGGGGAGGTGTTTAATGTG GATTTAGAAGATCGTCAAAAAATCGCCACTTCTTTTAAGGAATGGTTTTTGACAAAGTGTGAAGAGTTTGAAATAAAAGA GATTAAGGAATTTTAA
Upstream 100 bases:
>100_bases AAAGATTTGCATTTGAGCAAGAAAGAAAGCGAAATCAACCGCAGTGCTTTTAATGCTTTTCGTAGGAATTATTATAAAAA AAGAGCTAAGGAGTTAGAAA
Downstream 100 bases:
>100_bases TGCAAGATTTTGAAGAAATTAAAAAGCGTTTTGATCGATCAAAGACTGAATTTTCAAGCAATGTGAAAGACAAGGTGGGA GAGTATATCGTTCAAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MKLPKDFEDYCEAYGNFNENGLEIFGTLKSQATDKLPAFQAATKLYSQHYDLEENEIVIYYDDYLNAVVVLNEEGEVFNV DLEDRQKIATSFKEWFLTKCEEFEIKEIKEF
Sequences:
>Translated_111_residues MKLPKDFEDYCEAYGNFNENGLEIFGTLKSQATDKLPAFQAATKLYSQHYDLEENEIVIYYDDYLNAVVVLNEEGEVFNV DLEDRQKIATSFKEWFLTKCEEFEIKEIKEF >Mature_111_residues MKLPKDFEDYCEAYGNFNENGLEIFGTLKSQATDKLPAFQAATKLYSQHYDLEENEIVIYYDDYLNAVVVLNEEGEVFNV DLEDRQKIATSFKEWFLTKCEEFEIKEIKEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13103; Mature: 13103
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPKDFEDYCEAYGNFNENGLEIFGTLKSQATDKLPAFQAATKLYSQHYDLEENEIVIY CCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEE YDDYLNAVVVLNEEGEVFNVDLEDRQKIATSFKEWFLTKCEEFEIKEIKEF EECCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC >Mature Secondary Structure MKLPKDFEDYCEAYGNFNENGLEIFGTLKSQATDKLPAFQAATKLYSQHYDLEENEIVIY CCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEE YDDYLNAVVVLNEEGEVFNVDLEDRQKIATSFKEWFLTKCEEFEIKEIKEF EECCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA