| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is ftsZ [H]
Identifier: 188527798
GI number: 188527798
Start: 1023653
End: 1024801
Strand: Direct
Name: ftsZ [H]
Synonym: HPSH_05170
Alternate gene names: 188527798
Gene position: 1023653-1024801 (Clockwise)
Preceding gene: 188527797
Following gene: 188527812
Centisome position: 63.64
GC content: 43.6
Gene sequence:
>1149_bases ATGGTTCATCAGTCAGAGATGGAAAATTATAATATTGGTCAAGCAAGCATTGAAGAAGTAAGCGATCCAGCTTATAAAGG GGCTAAGATTGTCGTCATCGGTGTTGGAGGTGGGGGATCTAACATGATTAAACACTTGGTTGAATACGGCGTGCATCAAG ATGTTACCCCCATTGCTGTTAATACTGATGGCCAACACCTCAAAAACAATCCCGCTCCGGTTAAAATCCTTTTAGGCAAA GAATCTACTGGAGGTTTAGGTGCTGGGGGGATTCCTGATATTGGTAGAAAAGCCGCTGAAGAAAGCGCTAATGAAGTGAG AGAAGCGATTAAAGACGCTAAATTAGTCATTATCTCTACAGGACTTGGAGGAGGGACTGGGACTGGAGCCACCCCTACTA TCGTTAAAATCGCAAAAGAAGTGGGAGCGCTCACGATTGCTGTCGTTACCAAGCCTTTCAAATACGAAGGGAATCAAAAA AAGAAGAGGGCTGAAGAGGGATTGAAAGAATTGGAGCAATCCAGCGATTCTATTTTGGTTATCCCTAATGACAAAATCCT TCTCACCATGAAGAAAAACGCTAGCATCACGGAATGTTATAGGGAAGTTGATGATGTTTTGGTTAGGGCTGTGAGCGGTA TTTCTACCATCATCACTAAACCCGGTAATATCAATGTTGATTTTGCCGATTTAAAGAGCGCTCTTGGTTTTAAAGGCTTT GCGTTAATGGGTATTGGTGAAGCCACTGGCGAAGATTCTGCTAAAGCAGCGGTGGAAAATGCAATCCAATCGCCTCTTCT TGATGACGCTTCTATTGAAGGGGCTAAGAGCATTATTGTCTTTTTTGAGCACCACCCTGATTATCCTATGATGGCTTATT CTAACGCATGCGATTTTATTCAAGATCAAGCCCATCAAGATGTTGATGTTAAGTTTGGCCAACACACGAGCGAGAATATC CCCATTGATCATGTGCGCGTTACTATCATTGCAACCGGCGCTGAAAGAAACAGCGTTGGAGCGAGTTTGGAATCTATCGC TACGCCCTCTCAGCCTGTGATGAAACAAACAAGAAAAGTGGGTAATGGTGAGATCCCTACTGAAGAAGAGCTATCCATAC CCACGACCATGAGGATCCAGCAAGATTAA
Upstream 100 bases:
>100_bases TAATAAATAGTTATCAAAAGCTAGAAAACATGGTATAATCCTTTAGTTATTTATCAAAGTTTAAGATTTGCAAAAATCGT ATCTCAAGGGGAATGTGGCT
Downstream 100 bases:
>100_bases TTGCAGATCTCGCTTTTCTCCCCTATTTTTATAGGGCTATAATAAAGCGGTTTGTTGGGTTTTTTCTCATTCGTTTTTTA GAGTGAAACCGCCCCTTTCT
Product: cell division protein FtsZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MVHQSEMENYNIGQASIEEVSDPAYKGAKIVVIGVGGGGSNMIKHLVEYGVHQDVTPIAVNTDGQHLKNNPAPVKILLGK ESTGGLGAGGIPDIGRKAAEESANEVREAIKDAKLVIISTGLGGGTGTGATPTIVKIAKEVGALTIAVVTKPFKYEGNQK KKRAEEGLKELEQSSDSILVIPNDKILLTMKKNASITECYREVDDVLVRAVSGISTIITKPGNINVDFADLKSALGFKGF ALMGIGEATGEDSAKAAVENAIQSPLLDDASIEGAKSIIVFFEHHPDYPMMAYSNACDFIQDQAHQDVDVKFGQHTSENI PIDHVRVTIIATGAERNSVGASLESIATPSQPVMKQTRKVGNGEIPTEEELSIPTTMRIQQD
Sequences:
>Translated_382_residues MVHQSEMENYNIGQASIEEVSDPAYKGAKIVVIGVGGGGSNMIKHLVEYGVHQDVTPIAVNTDGQHLKNNPAPVKILLGK ESTGGLGAGGIPDIGRKAAEESANEVREAIKDAKLVIISTGLGGGTGTGATPTIVKIAKEVGALTIAVVTKPFKYEGNQK KKRAEEGLKELEQSSDSILVIPNDKILLTMKKNASITECYREVDDVLVRAVSGISTIITKPGNINVDFADLKSALGFKGF ALMGIGEATGEDSAKAAVENAIQSPLLDDASIEGAKSIIVFFEHHPDYPMMAYSNACDFIQDQAHQDVDVKFGQHTSENI PIDHVRVTIIATGAERNSVGASLESIATPSQPVMKQTRKVGNGEIPTEEELSIPTTMRIQQD >Mature_382_residues MVHQSEMENYNIGQASIEEVSDPAYKGAKIVVIGVGGGGSNMIKHLVEYGVHQDVTPIAVNTDGQHLKNNPAPVKILLGK ESTGGLGAGGIPDIGRKAAEESANEVREAIKDAKLVIISTGLGGGTGTGATPTIVKIAKEVGALTIAVVTKPFKYEGNQK KKRAEEGLKELEQSSDSILVIPNDKILLTMKKNASITECYREVDDVLVRAVSGISTIITKPGNINVDFADLKSALGFKGF ALMGIGEATGEDSAKAAVENAIQSPLLDDASIEGAKSIIVFFEHHPDYPMMAYSNACDFIQDQAHQDVDVKFGQHTSENI PIDHVRVTIIATGAERNSVGASLESIATPSQPVMKQTRKVGNGEIPTEEELSIPTTMRIQQD
Specific function: This protein is essential to the cell-division process. It seems to assemble into a dynamic ring on the inner surface of the cytoplasmic membrane at the place where division will occur, and the formation of the ring is the signal for septation to begin. B
COG id: COG0206
COG function: function code D; Cell division GTPase
Gene ontology:
Cell location: Cytoplasm. Note=Assembles at the inner surface of the cytoplasmic membrane (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsZ family [H]
Homologues:
Organism=Escherichia coli, GI1786284, Length=364, Percent_Identity=36.5384615384615, Blast_Score=201, Evalue=6e-53,
Paralogues:
None
Copy number: 320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020805 - InterPro: IPR000158 - InterPro: IPR008280 - InterPro: IPR018316 - InterPro: IPR003008 [H]
Pfam domain/function: PF00091 Tubulin [H]
EC number: NA
Molecular weight: Translated: 40551; Mature: 40551
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS01134 FTSZ_1 ; PS01135 FTSZ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHQSEMENYNIGQASIEEVSDPAYKGAKIVVIGVGGGGSNMIKHLVEYGVHQDVTPIAV CCCCHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEE NTDGQHLKNNPAPVKILLGKESTGGLGAGGIPDIGRKAAEESANEVREAIKDAKLVIIST CCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE GLGGGTGTGATPTIVKIAKEVGALTIAVVTKPFKYEGNQKKKRAEEGLKELEQSSDSILV CCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEE IPNDKILLTMKKNASITECYREVDDVLVRAVSGISTIITKPGNINVDFADLKSALGFKGF EECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHEEECCCCCEEEHHHHHHHHCCCCE ALMGIGEATGEDSAKAAVENAIQSPLLDDASIEGAKSIIVFFEHHPDYPMMAYSNACDFI EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCHHHHH QDQAHQDVDVKFGQHTSENIPIDHVRVTIIATGAERNSVGASLESIATPSQPVMKQTRKV HHHCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHC GNGEIPTEEELSIPTTMRIQQD CCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MVHQSEMENYNIGQASIEEVSDPAYKGAKIVVIGVGGGGSNMIKHLVEYGVHQDVTPIAV CCCCHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEE NTDGQHLKNNPAPVKILLGKESTGGLGAGGIPDIGRKAAEESANEVREAIKDAKLVIIST CCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE GLGGGTGTGATPTIVKIAKEVGALTIAVVTKPFKYEGNQKKKRAEEGLKELEQSSDSILV CCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEE IPNDKILLTMKKNASITECYREVDDVLVRAVSGISTIITKPGNINVDFADLKSALGFKGF EECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHEEECCCCCEEEHHHHHHHHCCCCE ALMGIGEATGEDSAKAAVENAIQSPLLDDASIEGAKSIIVFFEHHPDYPMMAYSNACDFI EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCHHHHH QDQAHQDVDVKFGQHTSENIPIDHVRVTIIATGAERNSVGASLESIATPSQPVMKQTRKV HHHCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHC GNGEIPTEEELSIPTTMRIQQD CCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]