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The map label for this gene is 188527789

Identifier: 188527789

GI number: 188527789

Start: 1011608

End: 1012687

Strand: Reverse

Name: 188527789

Synonym: HPSH_05125

Alternate gene names: NA

Gene position: 1012687-1011608 (Counterclockwise)

Preceding gene: 188527790

Following gene: 188527788

Centisome position: 62.96

GC content: 38.89

Gene sequence:

>1080_bases
TTGAAGCGGGCGTTATTGTGGCTTATGTTAATGGGCGTTTTTTCAATGGGTGTTTTTTTAGAGGCTAAAGAGTATCCAGA
AATTGTTTTAGAAGAAAAAAACTTGCAACCTATGGGGTTAAAGGTTATTAAATTAGATAAAGAAATTTTTAGTAAAGGGC
TTCCTTTTAACGCTTATATTGATTTTGATAGTAAAAGCTCTGTGGTGCAGAGCTTGAGCTTTGATGCGTCTGTGGTCGCT
GTTTATAAAAGAGAGGGCGAGCAGGTGAAAGCTGGAGATGCGATCTGTGAAGTGAGCTCTATTGATTTGAGCAATTTGTA
TTTTGAATTGCAAAACAACCAAAATAAATTAAAAATCGCTAAAGATATTACTAAAAAAGATTTAGAGCTTTATAGGGCTG
GGGTGATCCCTAAAAGGGAGTATCAAACTAGTTTTTTAGCCAGCCAGGAAATGGGCTTAAAGGTGGAACAATTAGAGAGC
GCGTTTAAAAGCTTTGGCGTGGATCCTAAAAACCCTAAAGGGCAGTATGGTTTTAGGATTGTGGCTAGAGATAGCGGTCT
TTTAGCGTTAGCGCCTAAAAATGTGGGTGAGAAGATTTTAGCTTTCACTAGTTATGTGCGTATTTCAAAAAGCGATAATT
TGATCGCTCAAATTAAATTGCCTATAGGCGTTTCTAAATCCATTAAAAGAGATTCGCCGGTCTATAATGAAGAGGGGGAA
AAAATTGGAAAGATTCAAAGCGTTTCGGTGGTGTTAGACAAAGGCTCTAACACGATTTTAGCCACCGCTTTATTAGATGA
GGGCAATTACCATGTGGGGGAAATGGTAGAAATGTATATTCAAGGCTCACAGCCTAAAGGCTCGGTTTTGATCCCTTCAA
ACGCTTTGATTAGAAACGGAAAGGATTACCTGGTGTTTGTGAGAACGCCTAAAGGTTTTAGGCCTGTGGTGGTTCAAGTT
TTAGAAGAGCGTAGCAAGATTTTTATCGTGAACGCTAAAAATTTACACCCTAATGACAGCGTGGCAGTGGGGTCGTTGAT
AGGGTTAAAAGGCATGATCAACAATTTAGGGGAAGAATAA

Upstream 100 bases:

>100_bases
CCCTCATCACTCTAGCGGAAGCTAAGATTGAATACATTGATATTAGCGCGCTTTTAGAAGAAACTTTAGGGGAGAGCTTG
ACCAGATTAGGAGTATTGCA

Downstream 100 bases:

>100_bases
TGCTCGCTTCCATTATTGAATTTTCCTTACGCCAGCGAATAATCGTGATTGTTTGCGCGATTCTTGTTTTGTTTTTTGGG
ACTTATAGTTTTATTAATAC

Product: cobalt-zinc-cadmium resistance protein

Products: NA

Alternate protein names: Secretion Protein HlyD; Cadmium-Zinc-Nickel Resistance Protein CznB; RND Family Efflux Transporter MFP Subunit; Cobalt-Zinc-Cadmium Resistance Protein; Efflux Transporter Rnd Family Mfp Subunit; Nickel-Cobalt-Cadmium Resistance Protein

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKRALLWLMLMGVFSMGVFLEAKEYPEIVLEEKNLQPMGLKVIKLDKEIFSKGLPFNAYIDFDSKSSVVQSLSFDASVVA
VYKREGEQVKAGDAICEVSSIDLSNLYFELQNNQNKLKIAKDITKKDLELYRAGVIPKREYQTSFLASQEMGLKVEQLES
AFKSFGVDPKNPKGQYGFRIVARDSGLLALAPKNVGEKILAFTSYVRISKSDNLIAQIKLPIGVSKSIKRDSPVYNEEGE
KIGKIQSVSVVLDKGSNTILATALLDEGNYHVGEMVEMYIQGSQPKGSVLIPSNALIRNGKDYLVFVRTPKGFRPVVVQV
LEERSKIFIVNAKNLHPNDSVAVGSLIGLKGMINNLGEE

Sequences:

>Translated_359_residues
MKRALLWLMLMGVFSMGVFLEAKEYPEIVLEEKNLQPMGLKVIKLDKEIFSKGLPFNAYIDFDSKSSVVQSLSFDASVVA
VYKREGEQVKAGDAICEVSSIDLSNLYFELQNNQNKLKIAKDITKKDLELYRAGVIPKREYQTSFLASQEMGLKVEQLES
AFKSFGVDPKNPKGQYGFRIVARDSGLLALAPKNVGEKILAFTSYVRISKSDNLIAQIKLPIGVSKSIKRDSPVYNEEGE
KIGKIQSVSVVLDKGSNTILATALLDEGNYHVGEMVEMYIQGSQPKGSVLIPSNALIRNGKDYLVFVRTPKGFRPVVVQV
LEERSKIFIVNAKNLHPNDSVAVGSLIGLKGMINNLGEE
>Mature_359_residues
MKRALLWLMLMGVFSMGVFLEAKEYPEIVLEEKNLQPMGLKVIKLDKEIFSKGLPFNAYIDFDSKSSVVQSLSFDASVVA
VYKREGEQVKAGDAICEVSSIDLSNLYFELQNNQNKLKIAKDITKKDLELYRAGVIPKREYQTSFLASQEMGLKVEQLES
AFKSFGVDPKNPKGQYGFRIVARDSGLLALAPKNVGEKILAFTSYVRISKSDNLIAQIKLPIGVSKSIKRDSPVYNEEGE
KIGKIQSVSVVLDKGSNTILATALLDEGNYHVGEMVEMYIQGSQPKGSVLIPSNALIRNGKDYLVFVRTPKGFRPVVVQV
LEERSKIFIVNAKNLHPNDSVAVGSLIGLKGMINNLGEE

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39761; Mature: 39761

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRALLWLMLMGVFSMGVFLEAKEYPEIVLEEKNLQPMGLKVIKLDKEIFSKGLPFNAYI
CCHHHHHHHHHHHHHHCEEEECCCCCCEEEECCCCCCCCEEEEEECHHHHHCCCCEEEEE
DFDSKSSVVQSLSFDASVVAVYKREGEQVKAGDAICEVSSIDLSNLYFELQNNQNKLKIA
ECCCHHHHHHHHCCCCEEEEEEECCCCEEECCCCEEEEECCCHHHEEEEEECCCCEEEHH
KDITKKDLELYRAGVIPKREYQTSFLASQEMGLKVEQLESAFKSFGVDPKNPKGQYGFRI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEE
VARDSGLLALAPKNVGEKILAFTSYVRISKSDNLIAQIKLPIGVSKSIKRDSPVYNEEGE
EEECCCEEEECCCCCCHHHHHHHHEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
KIGKIQSVSVVLDKGSNTILATALLDEGNYHVGEMVEMYIQGSQPKGSVLIPSNALIRNG
HHCCEEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHEEECCCCCCCEEECCCHHEECC
KDYLVFVRTPKGFRPVVVQVLEERSKIFIVNAKNLHPNDSVAVGSLIGLKGMINNLGEE
CEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRALLWLMLMGVFSMGVFLEAKEYPEIVLEEKNLQPMGLKVIKLDKEIFSKGLPFNAYI
CCHHHHHHHHHHHHHHCEEEECCCCCCEEEECCCCCCCCEEEEEECHHHHHCCCCEEEEE
DFDSKSSVVQSLSFDASVVAVYKREGEQVKAGDAICEVSSIDLSNLYFELQNNQNKLKIA
ECCCHHHHHHHHCCCCEEEEEEECCCCEEECCCCEEEEECCCHHHEEEEEECCCCEEEHH
KDITKKDLELYRAGVIPKREYQTSFLASQEMGLKVEQLESAFKSFGVDPKNPKGQYGFRI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEE
VARDSGLLALAPKNVGEKILAFTSYVRISKSDNLIAQIKLPIGVSKSIKRDSPVYNEEGE
EEECCCEEEECCCCCCHHHHHHHHEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
KIGKIQSVSVVLDKGSNTILATALLDEGNYHVGEMVEMYIQGSQPKGSVLIPSNALIRNG
HHCCEEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHEEECCCCCCCEEECCCHHEECC
KDYLVFVRTPKGFRPVVVQVLEERSKIFIVNAKNLHPNDSVAVGSLIGLKGMINNLGEE
CEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA