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The map label for this gene is 188527722

Identifier: 188527722

GI number: 188527722

Start: 929699

End: 931930

Strand: Reverse

Name: 188527722

Synonym: HPSH_04720

Alternate gene names: NA

Gene position: 931930-929699 (Counterclockwise)

Preceding gene: 188527724

Following gene: 188527721

Centisome position: 57.94

GC content: 46.28

Gene sequence:

>2232_bases
ATGAAAAAACACATCCTTTCATTCGCTTTAGGCTCGCTTTTAGTTTCCACTTTGAGCGCTGAAGACGACGGCTTTTACAT
GAGCGCGGGCTATCAAATCGGTGAAGCCGCTCAAATGGTGAGCAACACCAAAGGCATCCAACAGCTTTCAGACAATTATG
AAAACTTGAGCAAGCTTTTAACCAGATACAGCACCCTAAGCAACTTCATCCAATTGGCCTCTGACCCGAGCGCGATCAAC
GCGGCGCGTGAAAATCTGGGCGCGAGCGCGAAGAACTTGATCGGCGATACCAAAAATTCCCCGGCCTATCAAGCCGTGCT
TTTAGCGATCAATGCGGCGGTGGGGTTTTGGAATGTCGTGGGCTATGCTACGCAATGCGGGGGTAATGGTAGTCAAAAAA
GCACCTCTTCAACCACCATCTTCAACAACGAGCCAGGGTATCGATCCACTTCCTTGACTTGTTCTTTGAACGGATATACC
CCTGGATACTATAGCCCTATGGGTATTGATAACATGAAAAAGCTTAACCAAGCCTATCAAATCCTCCAAGCGGCTTTAAA
AAAAGGCTTACCCGCACTCAAACAAAACAACGGGAAGGTTAATGTAACCTATACTTACACATGCTCAGGGGAAGGGAATA
CTAACTGCGATCCGTCACTATTTGATATAACAGGCACCAGCAAAAATGGCAATGGGCGAAATGGCGGAAGTAAAACCACC
ACCCAAACCATAGACGGCAAACCAGTGAGCACCACGATCAGCTCAAAAGTCGTCCAACCAACTGGTGGTGCAGCCTACAC
CGAAATCACCAACGCATTAAAAGATGTGCCTGATAGCGCTCAATTTCTCTTAGCGCAAGCGAGCACGCTCATCAACACCA
TCAACAGCGCATGCCCATGGTTTAGAGTGACTAATCAAAGTGGTGGCCCACAGATGAACCCGACTTCAGGGGGTTTGTGC
GTTTTTAAAGATGAAATCAGCGCGATCCAAAAGATGATCGCAGACGCGCAAGAGCTTGTCAATCAAACGAGCGTCATTAA
TAGTAACGAGCAATCAACTCAACAAGTGGGAGGCAGTGGAGGCAAGCCTTTCAACCCTTTCACAGACGCTAGCTTTGCGC
AAGGCATGCTCGCTAACGCTAGCGCGCAAGCCAAAATGCTTAATTTATCCCATCAAGTGGGGCAGGCCATTAACCCAGAC
AATCTTAGCGGGACTTTTCAAAAATTTGTTAAAAACTTTCTAGCCACATGCAACAACCCCTCAACAGCTGGCACTGGTGG
CACACAAGGTTCACCTCCAGGCACAGTGACCACTCAAACTTTCGCTTCCGGTTGTGCCTATGTGGAGCAAACCATAACGA
ATTTAAGCAACAGCATCGCTCATTTTGGCACTCAAGAGCAGCAAATAGAGCAAGCAGAAAACATCGCTGACACTCTAGTG
CATTTCAAATCTAGATACAGCGAATTGGGCAACACTTATAACAGCATCACCACCGCGCTCTCCAAAGTCCCTAACGCTCA
ATCTTTGCAAAATGTGGTGAGCAAAAAGAACAACCCCTATAGCCCGCAAGGCATAGAAACCAATTACTACCTCAATCAAA
ACTCTTACAACCAAGTCCAAACCATCAACCAAGAGCTAGGGCGTAACCCCTTTAGGAAATTGGGCATCGTCAGCTCTCAA
ACCAACAACGGCGCGATGAATGGGATCGGTATTCAAGTGGGTTACAAACAATTCTTTGGCCAAAAAAGAAAGTGGGGCGC
TAGGTATTACGGCTTTTTTGACTACAACCATGCGTTCATCAAATCCAGCTTTTTCAACTCGGCTTCTGATGTATGGACTT
ATGGTTTTGGAGCGGACGCTCTTTATAACTTCATCAACGATAAAGCCACCAATTTCTTAGGCAAAAACAACAAGCTTTCT
GTGGGGCTTTTTGGCGGGATTGCGTTAGCGGGCACTTCATGGCTTAATTCTGAGTATGTGAATTTAGCCACCGTGAATAA
TGTCTATAACGCTAAAATGAATGTGGCGAACTTCCAATTCTTATTCAACATGGGCGTGAGAATGAATCTCGCCAGGTCTA
AGAAAAAAGGCAGCGATCATGCCGCTCAGCATGGCATTGAACTAGGCGTGAAAATCCCCACCATCAACACGAATTACTAT
TCCTTTATGGGGGCTGAACTCAAATACCGCAGACTCTATAGCGTGTATTTGAACTATGTGTTCGCTTATTAA

Upstream 100 bases:

>100_bases
AAAAAAAAAACGCTTTTATGCTATAATGCTCCAAATATATTCTATTGAATGTATGAAATCCTACTAAATCCAATCCAATT
TAAAAGGAGAAAAAGAAAAC

Downstream 100 bases:

>100_bases
TGTTTGGCTCTTTGTAAAACTCCCTTTTTAGGGGATTTCTTTAAAGCTTTTCTTTTTAAAGTCTTTTTAAACCCTTTTTT
TTTTTGGGGGGGTTTGATCT

Product: outer membrane protein BabA

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HorB; Outer Membrane Protein HopG; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein HopD; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopF

Number of amino acids: Translated: 743; Mature: 743

Protein sequence:

>743_residues
MKKHILSFALGSLLVSTLSAEDDGFYMSAGYQIGEAAQMVSNTKGIQQLSDNYENLSKLLTRYSTLSNFIQLASDPSAIN
AARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVVGYATQCGGNGSQKSTSSTTIFNNEPGYRSTSLTCSLNGYT
PGYYSPMGIDNMKKLNQAYQILQAALKKGLPALKQNNGKVNVTYTYTCSGEGNTNCDPSLFDITGTSKNGNGRNGGSKTT
TQTIDGKPVSTTISSKVVQPTGGAAYTEITNALKDVPDSAQFLLAQASTLINTINSACPWFRVTNQSGGPQMNPTSGGLC
VFKDEISAIQKMIADAQELVNQTSVINSNEQSTQQVGGSGGKPFNPFTDASFAQGMLANASAQAKMLNLSHQVGQAINPD
NLSGTFQKFVKNFLATCNNPSTAGTGGTQGSPPGTVTTQTFASGCAYVEQTITNLSNSIAHFGTQEQQIEQAENIADTLV
HFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQVQTINQELGRNPFRKLGIVSSQ
TNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLS
VGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGVKIPTINTNYY
SFMGAELKYRRLYSVYLNYVFAY

Sequences:

>Translated_743_residues
MKKHILSFALGSLLVSTLSAEDDGFYMSAGYQIGEAAQMVSNTKGIQQLSDNYENLSKLLTRYSTLSNFIQLASDPSAIN
AARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVVGYATQCGGNGSQKSTSSTTIFNNEPGYRSTSLTCSLNGYT
PGYYSPMGIDNMKKLNQAYQILQAALKKGLPALKQNNGKVNVTYTYTCSGEGNTNCDPSLFDITGTSKNGNGRNGGSKTT
TQTIDGKPVSTTISSKVVQPTGGAAYTEITNALKDVPDSAQFLLAQASTLINTINSACPWFRVTNQSGGPQMNPTSGGLC
VFKDEISAIQKMIADAQELVNQTSVINSNEQSTQQVGGSGGKPFNPFTDASFAQGMLANASAQAKMLNLSHQVGQAINPD
NLSGTFQKFVKNFLATCNNPSTAGTGGTQGSPPGTVTTQTFASGCAYVEQTITNLSNSIAHFGTQEQQIEQAENIADTLV
HFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQVQTINQELGRNPFRKLGIVSSQ
TNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLS
VGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGVKIPTINTNYY
SFMGAELKYRRLYSVYLNYVFAY
>Mature_743_residues
MKKHILSFALGSLLVSTLSAEDDGFYMSAGYQIGEAAQMVSNTKGIQQLSDNYENLSKLLTRYSTLSNFIQLASDPSAIN
AARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVVGYATQCGGNGSQKSTSSTTIFNNEPGYRSTSLTCSLNGYT
PGYYSPMGIDNMKKLNQAYQILQAALKKGLPALKQNNGKVNVTYTYTCSGEGNTNCDPSLFDITGTSKNGNGRNGGSKTT
TQTIDGKPVSTTISSKVVQPTGGAAYTEITNALKDVPDSAQFLLAQASTLINTINSACPWFRVTNQSGGPQMNPTSGGLC
VFKDEISAIQKMIADAQELVNQTSVINSNEQSTQQVGGSGGKPFNPFTDASFAQGMLANASAQAKMLNLSHQVGQAINPD
NLSGTFQKFVKNFLATCNNPSTAGTGGTQGSPPGTVTTQTFASGCAYVEQTITNLSNSIAHFGTQEQQIEQAENIADTLV
HFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQVQTINQELGRNPFRKLGIVSSQ
TNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLS
VGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGVKIPTINTNYY
SFMGAELKYRRLYSVYLNYVFAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80198; Mature: 80198

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHILSFALGSLLVSTLSAEDDGFYMSAGYQIGEAAQMVSNTKGIQQLSDNYENLSKLL
CCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRYSTLSNFIQLASDPSAINAARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVV
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
GYATQCGGNGSQKSTSSTTIFNNEPGYRSTSLTCSLNGYTPGYYSPMGIDNMKKLNQAYQ
HHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
ILQAALKKGLPALKQNNGKVNVTYTYTCSGEGNTNCDPSLFDITGTSKNGNGRNGGSKTT
HHHHHHHHCCCHHHCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
TQTIDGKPVSTTISSKVVQPTGGAAYTEITNALKDVPDSAQFLLAQASTLINTINSACPW
EEECCCCCCEEHHHCCEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
FRVTNQSGGPQMNPTSGGLCVFKDEISAIQKMIADAQELVNQTSVINSNEQSTQQVGGSG
EEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
GKPFNPFTDASFAQGMLANASAQAKMLNLSHQVGQAINPDNLSGTFQKFVKNFLATCNNP
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
STAGTGGTQGSPPGTVTTQTFASGCAYVEQTITNLSNSIAHFGTQEQQIEQAENIADTLV
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
HFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQVQ
HHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHH
TINQELGRNPFRKLGIVSSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAFI
HHHHHHCCCHHHHHCCEECCCCCCCCCCEEEEECHHHHCCCHHCCCCEEEEEECCCHHHH
KSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEYV
HHHHCCCCCHHEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCHHCCCCCE
NLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGVKIPTINTNYY
EEEEECCHHHCEECHHHEEEEECCCCEEEHHHHHCCCCHHHHHCCCEEEEEECEECCCHH
SFMGAELKYRRLYSVYLNYVFAY
HHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKHILSFALGSLLVSTLSAEDDGFYMSAGYQIGEAAQMVSNTKGIQQLSDNYENLSKLL
CCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRYSTLSNFIQLASDPSAINAARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVV
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
GYATQCGGNGSQKSTSSTTIFNNEPGYRSTSLTCSLNGYTPGYYSPMGIDNMKKLNQAYQ
HHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
ILQAALKKGLPALKQNNGKVNVTYTYTCSGEGNTNCDPSLFDITGTSKNGNGRNGGSKTT
HHHHHHHHCCCHHHCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
TQTIDGKPVSTTISSKVVQPTGGAAYTEITNALKDVPDSAQFLLAQASTLINTINSACPW
EEECCCCCCEEHHHCCEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
FRVTNQSGGPQMNPTSGGLCVFKDEISAIQKMIADAQELVNQTSVINSNEQSTQQVGGSG
EEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
GKPFNPFTDASFAQGMLANASAQAKMLNLSHQVGQAINPDNLSGTFQKFVKNFLATCNNP
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
STAGTGGTQGSPPGTVTTQTFASGCAYVEQTITNLSNSIAHFGTQEQQIEQAENIADTLV
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
HFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQVQ
HHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHH
TINQELGRNPFRKLGIVSSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAFI
HHHHHHCCCHHHHHCCEECCCCCCCCCCEEEEECHHHHCCCHHCCCCEEEEEECCCHHHH
KSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEYV
HHHHCCCCCHHEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCHHCCCCCE
NLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGVKIPTINTNYY
EEEEECCHHHCEECHHHEEEEECCCCEEEHHHHHCCCCHHHHHCCCEEEEEECEECCCHH
SFMGAELKYRRLYSVYLNYVFAY
HHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA