Click here to switch to the map view.

The map label for this gene is fecD [C]

Identifier: 188527716

GI number: 188527716

Start: 926264

End: 927244

Strand: Reverse

Name: fecD [C]

Synonym: HPSH_04690

Alternate gene names: 188527716

Gene position: 927244-926264 (Counterclockwise)

Preceding gene: 188527717

Following gene: 188527715

Centisome position: 57.64

GC content: 46.08

Gene sequence:

>981_bases
ATGCTTAAAACCTATCATATTGCATTAGCTTGCGTGATTTTAGCGGTGGTGGTGCTTTTGTTTGGAGGGGAGTCCTTGAG
CTTTGAAGAATGGCAAGAAGTGTGCCTTAATGTGAAAAACCACTTTTTGCACAATGAAGAACTGAGCTCTTTAAGTATTA
TTATTTTAGAAATACGACTACCACGAGTGATTTTAGCGCTCCTGGTGGGAGCGAGTTTGTCCGGGAGTGGGGTGGTGATG
CAAACGATTTTTAGAAACCCCTTAGTGGATCCTTTTTTATTAGGGATTTCTAGCGGGGCGATGCTAGGCGTGGCGATGGC
GATAGCGATTCTTGAATCCAACATTGCGATTTTAGCGTTTTTTGGGGCGATTTTAGCCAGCCTTGCTGTCTTAGCGATGA
ATAGGGTTTTAGGCAATTCCGTCCTTTCGTTGGTGCTTTCAGGGGTGGTGTTGAGCGCGTTTTTAAGCGCCTTAGCCGGA
GCGATAAAATTCTTTGTGATCCCCCAAAAAGCGCAAGCGATTGTCGTGTGGCTTTTGGGGAGCTTGTCTTTGAGCAGTTA
TAAGGATTGCTTGATCGCTTTCATAGGGCTATCCTTAGGCTTTATCCCGCTTTTTTTGTTAAGGTGGCGCATCAATTTAT
TGAGCTTGAGCGATGCGCAAAGTTTGAGTTTGGGCATTAATCCGGTGCTGTTGCGATCGCTTTGTTTGGCGTGCGTGAGC
GTTGCGAGCGCTTTAGCGGTGAGCGTGTCTGGCACGATTGGCTGGATTGGGTTAGTCATTCCGCATGTAGCGAGGTTGTT
TTTTGGGGCGAATTTACAAAAACTGCTTTTAAGCTCTTTGTTAATGGGAGCGTTTTTCTTGCTTTTAGCGGATGTGGTGG
CTAAAACCATTACCCCCTATGATTTACCGGTAGGCATTGCGACAAGCGTTTTAGGAGCGCCTTTCTTCTTGTGGCTTTTA
TTCAGGACTAGGGGGGTGTGA

Upstream 100 bases:

>100_bases
ATCGGCTTAAAAACCCAATTATTGTTAGCGTTGTATAGAATCCTCCCTAACAGTTGGTATGATTCTTTGTTCAGATTAAT
CGTTCTTAAAAGGAGGCGTG

Downstream 100 bases:

>100_bases
TGGTCTTAGAAGTTAAAAACCTATCCTTTAAATATTCTCAAAAACTCATTTTGGATAAATTGAGTTTTAGCGTGCCAAAA
AACAGCATCACCAGCATTTT

Product: iron(III) dicitrate ABC transporter, permease protein (fecD)

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MLKTYHIALACVILAVVVLLFGGESLSFEEWQEVCLNVKNHFLHNEELSSLSIIILEIRLPRVILALLVGASLSGSGVVM
QTIFRNPLVDPFLLGISSGAMLGVAMAIAILESNIAILAFFGAILASLAVLAMNRVLGNSVLSLVLSGVVLSAFLSALAG
AIKFFVIPQKAQAIVVWLLGSLSLSSYKDCLIAFIGLSLGFIPLFLLRWRINLLSLSDAQSLSLGINPVLLRSLCLACVS
VASALAVSVSGTIGWIGLVIPHVARLFFGANLQKLLLSSLLMGAFFLLLADVVAKTITPYDLPVGIATSVLGAPFFLWLL
FRTRGV

Sequences:

>Translated_326_residues
MLKTYHIALACVILAVVVLLFGGESLSFEEWQEVCLNVKNHFLHNEELSSLSIIILEIRLPRVILALLVGASLSGSGVVM
QTIFRNPLVDPFLLGISSGAMLGVAMAIAILESNIAILAFFGAILASLAVLAMNRVLGNSVLSLVLSGVVLSAFLSALAG
AIKFFVIPQKAQAIVVWLLGSLSLSSYKDCLIAFIGLSLGFIPLFLLRWRINLLSLSDAQSLSLGINPVLLRSLCLACVS
VASALAVSVSGTIGWIGLVIPHVARLFFGANLQKLLLSSLLMGAFFLLLADVVAKTITPYDLPVGIATSVLGAPFFLWLL
FRTRGV
>Mature_326_residues
MLKTYHIALACVILAVVVLLFGGESLSFEEWQEVCLNVKNHFLHNEELSSLSIIILEIRLPRVILALLVGASLSGSGVVM
QTIFRNPLVDPFLLGISSGAMLGVAMAIAILESNIAILAFFGAILASLAVLAMNRVLGNSVLSLVLSGVVLSAFLSALAG
AIKFFVIPQKAQAIVVWLLGSLSLSSYKDCLIAFIGLSLGFIPLFLLRWRINLLSLSDAQSLSLGINPVLLRSLCLACVS
VASALAVSVSGTIGWIGLVIPHVARLFFGANLQKLLLSSLLMGAFFLLLADVVAKTITPYDLPVGIATSVLGAPFFLWLL
FRTRGV

Specific function: Part of a binding-protein-dependent transport system for an iron chelatin; probably responsible for the translocation of the substrate across the membrane (Potential) [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=277, Percent_Identity=37.9061371841155, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1790741, Length=280, Percent_Identity=35.3571428571429, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1788004, Length=307, Percent_Identity=33.2247557003257, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1786805, Length=285, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1786804, Length=294, Percent_Identity=30.2721088435374, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786347, Length=278, Percent_Identity=27.3381294964029, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34658; Mature: 34658

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTYHIALACVILAVVVLLFGGESLSFEEWQEVCLNVKNHFLHNEELSSLSIIILEIRL
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEHHH
PRVILALLVGASLSGSGVVMQTIFRNPLVDPFLLGISSGAMLGVAMAIAILESNIAILAF
HHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
FGAILASLAVLAMNRVLGNSVLSLVLSGVVLSAFLSALAGAIKFFVIPQKAQAIVVWLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH
SLSLSSYKDCLIAFIGLSLGFIPLFLLRWRINLLSLSDAQSLSLGINPVLLRSLCLACVS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHH
VASALAVSVSGTIGWIGLVIPHVARLFFGANLQKLLLSSLLMGAFFLLLADVVAKTITPY
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLPVGIATSVLGAPFFLWLLFRTRGV
CCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKTYHIALACVILAVVVLLFGGESLSFEEWQEVCLNVKNHFLHNEELSSLSIIILEIRL
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEHHH
PRVILALLVGASLSGSGVVMQTIFRNPLVDPFLLGISSGAMLGVAMAIAILESNIAILAF
HHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
FGAILASLAVLAMNRVLGNSVLSLVLSGVVLSAFLSALAGAIKFFVIPQKAQAIVVWLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH
SLSLSSYKDCLIAFIGLSLGFIPLFLLRWRINLLSLSDAQSLSLGINPVLLRSLCLACVS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHH
VASALAVSVSGTIGWIGLVIPHVARLFFGANLQKLLLSSLLMGAFFLLLADVVAKTITPY
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLPVGIATSVLGAPFFLWLLFRTRGV
CCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]