| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527689
Identifier: 188527689
GI number: 188527689
Start: 899648
End: 899938
Strand: Reverse
Name: 188527689
Synonym: HPSH_04555
Alternate gene names: NA
Gene position: 899938-899648 (Counterclockwise)
Preceding gene: 188527690
Following gene: 188527688
Centisome position: 55.95
GC content: 24.4
Gene sequence:
>291_bases ATGACAAAAGAAACTGATATTGATTTGATTAGAAATTATTTAGAAAAAATGGCATCTATTATTAAAAGTTCTCAAAGCAT TATCAATGCTCCCCATTTTCTAAAAGATGAAAATCAAGCAAAAATATTACAAGAAAATCTAAAAGAAAATTTCACTCTTT TAATGGAATATATTAGTGAAGTTTGGGTTAAAAGCGAAGAGGAGTTTGAAGAGTTTATGAAAGATGAGAGTTTTGAGAAT GATTTTATGTATTTTATGAGTTTATTAGATAATAAAATCAAAGTAGAATAA
Upstream 100 bases:
>100_bases GCGAAAAAACAAAAATTTTAAACCTAGCTATCAAAAAAAGCGCTTTCATCGTAGCGTATTGTTTAAAAGGGGATAAGAAA ATTTTTAAAGGGATGAATTT
Downstream 100 bases:
>100_bases ATGCAAATTTATAAGCCTTATTGCTATATCATTTCTATTTTAGCCATTCCTTTTATTTTTTTAGGTGTATCGCATTATTT CTTAGATTTTCCTAGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTKETDIDLIRNYLEKMASIIKSSQSIINAPHFLKDENQAKILQENLKENFTLLMEYISEVWVKSEEEFEEFMKDESFEN DFMYFMSLLDNKIKVE
Sequences:
>Translated_96_residues MTKETDIDLIRNYLEKMASIIKSSQSIINAPHFLKDENQAKILQENLKENFTLLMEYISEVWVKSEEEFEEFMKDESFEN DFMYFMSLLDNKIKVE >Mature_95_residues TKETDIDLIRNYLEKMASIIKSSQSIINAPHFLKDENQAKILQENLKENFTLLMEYISEVWVKSEEEFEEFMKDESFEND FMYFMSLLDNKIKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11541; Mature: 11410
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKETDIDLIRNYLEKMASIIKSSQSIINAPHFLKDENQAKILQENLKENFTLLMEYISE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VWVKSEEEFEEFMKDESFENDFMYFMSLLDNKIKVE HHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKETDIDLIRNYLEKMASIIKSSQSIINAPHFLKDENQAKILQENLKENFTLLMEYISE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VWVKSEEEFEEFMKDESFENDFMYFMSLLDNKIKVE HHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA