Click here to switch to the map view.

The map label for this gene is 188527683

Identifier: 188527683

GI number: 188527683

Start: 893095

End: 894273

Strand: Direct

Name: 188527683

Synonym: HPSH_04525

Alternate gene names: NA

Gene position: 893095-894273 (Clockwise)

Preceding gene: 188527682

Following gene: 188527685

Centisome position: 55.52

GC content: 35.11

Gene sequence:

>1179_bases
ATGAAAGAAACAAGACTTTTAAAGTTGAGAGCTTTAGCATGTTTAATGGGATTAGGCGTGAGTGGGTGTGCGTTTTTAGA
CAAGCAAATTTTAAACGACCACTTGACTAAGGCTAAAAACAATCCAAAATACGATTGCCAAAAAGAAATGTGGTCTTTCC
CTAAAAAATACGATGGGATAAATCAGTGTTTAAAGGCTCAAGAAGAGCTTATCGAACCGATTATCACTAAAAAGATTGAT
CAGTATCAATGCGATGATTTCACTAATGAAGGCTTAAAAGATAAGTGCTTTAAAAGAAACGATGCCTACTTAAACACTCT
TTTAACGCCCATCATTCAAAAACAAGAGCGTCGTTTTAACTGCTCTGACTTCCATAACCCAGAACTAAAAGAACAATGCA
TGGATAAAACTAACGCTTATGAAAAGCAAAAAAAAGGGCAAGAAAGACTGATTAATCTTGCGCAATTAGAAGCGTTTGAA
AAAGAATACGCGCAATACAAACCATACATTATCCCTTACTTCACCAAAGAATGCGTTAAAAATGCGCCCAATTTAGCTAA
CAAGGAAAGACTATGCCAAAAAGAAGTGCATGAAAAATTTAGCGATCCTTATTCTAGCTCTAAAGAATTGAGCGTTAAAT
CAGCTATTTCTTTTTGCATTAAAAAAGTTGATGCTAAATTAGAAAAAGCCGCTCTTATGAATGGCGTTTATATAAGCCCT
TATAAAAAATCCACCCATTGCCAAAGAACACATTTAGAAAATAAGAGCTTGAAAGAAATCGCTTTAGAGATGAACCCTAA
ATTAGAAAAGCAAAGCCCTTTTATTGATGCGCACCAAATGGCTATTCAATCTGCGGAGCTGTTGAGAAAGAATAAAGATG
TCTTAATCGCTTTTGCTACAGATATTTGCATGGAGCGTAACGAACACAAAAAAGAAGAGTTTAAAAGCCTTAAAGAAGCT
TGCGCCCAAGAGCAAGCCAAAGCCTATAACCACAAAGAGCACTTTGACAAATTCATACAAGATTATCAAAAAGGCTTAAA
AACTTGTCTTTTAGACACTTCTAACACTAAAGAAGAAGTGGAGCAAAATTTTTCACAATGCCAAAAAGAGCAATTGAGAG
ACGATAACAAAGCCTTGGGCTTCACTTTAGAAGAATTGGTTAAAAAATACGCTAAGTAA

Upstream 100 bases:

>100_bases
GTTTTTTATTTAGAACACAAGAAAAAAGAAATGAAGCAAATGCTTTTAGATAAGGCGAGCAAGTTGTGATTTTATGGTGT
TTTCATACCAAGGAGCTTAA

Downstream 100 bases:

>100_bases
AATTATTTAATTTTATGGATGGTTTTAAAAATCCATTTCATGGTTATTGTTAGGGTTTGTGGGTTCATTGGTAGTTTTGT
TAAAATCTTGAGTGGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKETRLLKLRALACLMGLGVSGCAFLDKQILNDHLTKAKNNPKYDCQKEMWSFPKKYDGINQCLKAQEELIEPIITKKID
QYQCDDFTNEGLKDKCFKRNDAYLNTLLTPIIQKQERRFNCSDFHNPELKEQCMDKTNAYEKQKKGQERLINLAQLEAFE
KEYAQYKPYIIPYFTKECVKNAPNLANKERLCQKEVHEKFSDPYSSSKELSVKSAISFCIKKVDAKLEKAALMNGVYISP
YKKSTHCQRTHLENKSLKEIALEMNPKLEKQSPFIDAHQMAIQSAELLRKNKDVLIAFATDICMERNEHKKEEFKSLKEA
CAQEQAKAYNHKEHFDKFIQDYQKGLKTCLLDTSNTKEEVEQNFSQCQKEQLRDDNKALGFTLEELVKKYAK

Sequences:

>Translated_392_residues
MKETRLLKLRALACLMGLGVSGCAFLDKQILNDHLTKAKNNPKYDCQKEMWSFPKKYDGINQCLKAQEELIEPIITKKID
QYQCDDFTNEGLKDKCFKRNDAYLNTLLTPIIQKQERRFNCSDFHNPELKEQCMDKTNAYEKQKKGQERLINLAQLEAFE
KEYAQYKPYIIPYFTKECVKNAPNLANKERLCQKEVHEKFSDPYSSSKELSVKSAISFCIKKVDAKLEKAALMNGVYISP
YKKSTHCQRTHLENKSLKEIALEMNPKLEKQSPFIDAHQMAIQSAELLRKNKDVLIAFATDICMERNEHKKEEFKSLKEA
CAQEQAKAYNHKEHFDKFIQDYQKGLKTCLLDTSNTKEEVEQNFSQCQKEQLRDDNKALGFTLEELVKKYAK
>Mature_392_residues
MKETRLLKLRALACLMGLGVSGCAFLDKQILNDHLTKAKNNPKYDCQKEMWSFPKKYDGINQCLKAQEELIEPIITKKID
QYQCDDFTNEGLKDKCFKRNDAYLNTLLTPIIQKQERRFNCSDFHNPELKEQCMDKTNAYEKQKKGQERLINLAQLEAFE
KEYAQYKPYIIPYFTKECVKNAPNLANKERLCQKEVHEKFSDPYSSSKELSVKSAISFCIKKVDAKLEKAALMNGVYISP
YKKSTHCQRTHLENKSLKEIALEMNPKLEKQSPFIDAHQMAIQSAELLRKNKDVLIAFATDICMERNEHKKEEFKSLKEA
CAQEQAKAYNHKEHFDKFIQDYQKGLKTCLLDTSNTKEEVEQNFSQCQKEQLRDDNKALGFTLEELVKKYAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45713; Mature: 45713

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCHHCCCHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHCCCCCHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA