| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527642
Identifier: 188527642
GI number: 188527642
Start: 844314
End: 844511
Strand: Reverse
Name: 188527642
Synonym: HPSH_04320
Alternate gene names: NA
Gene position: 844511-844314 (Counterclockwise)
Preceding gene: 188527643
Following gene: 188527641
Centisome position: 52.5
GC content: 33.33
Gene sequence:
>198_bases TTGACTAAAGAAAGAGTAAGAGAAAATTTCAAAAATTTAGGTGTTCTAGTGGTTTATTATTCACTGCATGGCCCACACAA GCGACCTATAAATTCTTTTTTTAGATTTAAGAATAGTTATTTGCAATATGAGTCTAGCTACGAGTTGGTGGGGTTGATCA AATCCATTGGCAAGGCTTTAAAAATAGAAACCAACTGA
Upstream 100 bases:
>100_bases AACGACTGTCAATAACGAAACCCAAAAATCTCAAGCAACAAGCGTTACCAACGAACCAACTGAAGCTAAAGAGACTAAAG ATTGAGGCAAAACAACGATT
Downstream 100 bases:
>100_bases AAAAAGGAAACTAATGTTTGGAAAACTAGCAACCGCTGTATCGCTCATAGGCTTACTAACCTCTAACACTCTTTATGCTA AAGAAATAAGTGAAGCCGAT
Product: cag pathogenicity island protein (cag theta, cag2)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MTKERVRENFKNLGVLVVYYSLHGPHKRPINSFFRFKNSYLQYESSYELVGLIKSIGKALKIETN
Sequences:
>Translated_65_residues MTKERVRENFKNLGVLVVYYSLHGPHKRPINSFFRFKNSYLQYESSYELVGLIKSIGKALKIETN >Mature_64_residues TKERVRENFKNLGVLVVYYSLHGPHKRPINSFFRFKNSYLQYESSYELVGLIKSIGKALKIETN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7653; Mature: 7522
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKERVRENFKNLGVLVVYYSLHGPHKRPINSFFRFKNSYLQYESSYELVGLIKSIGKAL CCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHE KIETN ECCCC >Mature Secondary Structure TKERVRENFKNLGVLVVYYSLHGPHKRPINSFFRFKNSYLQYESSYELVGLIKSIGKAL CHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHE KIETN ECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA