Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527599

Identifier: 188527599

GI number: 188527599

Start: 797415

End: 797612

Strand: Direct

Name: 188527599

Synonym: HPSH_04105

Alternate gene names: NA

Gene position: 797415-797612 (Clockwise)

Preceding gene: 188527597

Following gene: 188527605

Centisome position: 49.57

GC content: 33.84

Gene sequence:

>198_bases
GTGGCAGGCATTTTGCATCTTCAAGCGTGTATTTTTTCTCACTTCATTTCTTTTAGTGGGGAATTTGTAATAGACATGGC
GTTTGGCAAAAAAGATAAAATCTTTAAAACTCGCTTTGGAATTTCTGTTGTTAGCGGTATTTCATTATTGCTTGGCACTT
TACACACCAGAGCATTTATTTTTTGTATGGTTTATTAA

Upstream 100 bases:

>100_bases
AATACAAAAGTTAGGTCTAATGGTATTTTTAAAAAAGAAAGAAATCCTTGCACATGAAAAATCAAAAGCCGCTTTTCTAG
GAATTAGTCTTTAAGGAATA

Downstream 100 bases:

>100_bases
TTGGTGGTGGGCTGTCCTTTTTATAGAAGCGAAAGCTTGGCTTATTAGTAAGCTGTTTTATTCCAATTAATAAGGTTACC
CCCTACTTAAGGCATCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MAGILHLQACIFSHFISFSGEFVIDMAFGKKDKIFKTRFGISVVSGISLLLGTLHTRAFIFCMVY

Sequences:

>Translated_65_residues
MAGILHLQACIFSHFISFSGEFVIDMAFGKKDKIFKTRFGISVVSGISLLLGTLHTRAFIFCMVY
>Mature_64_residues
AGILHLQACIFSHFISFSGEFVIDMAFGKKDKIFKTRFGISVVSGISLLLGTLHTRAFIFCMVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7263; Mature: 7132

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGILHLQACIFSHFISFSGEFVIDMAFGKKDKIFKTRFGISVVSGISLLLGTLHTRAFI
CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE
FCMVY
EEEEC
>Mature Secondary Structure 
AGILHLQACIFSHFISFSGEFVIDMAFGKKDKIFKTRFGISVVSGISLLLGTLHTRAFI
CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE
FCMVY
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA