| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
Click here to switch to the map view.
The map label for this gene is 188527594
Identifier: 188527594
GI number: 188527594
Start: 794682
End: 794789
Strand: Direct
Name: 188527594
Synonym: HPSH_04080
Alternate gene names: NA
Gene position: 794682-794789 (Clockwise)
Preceding gene: 188527593
Following gene: 188527595
Centisome position: 49.4
GC content: 37.96
Gene sequence:
>108_bases ATGCAGACTATAAAGAACAAAGCCTTTCGTGTTAGCATTCAATGGAATGCTTTAGTTAGGAAGCCCCTTGCTTTAGAAAG GGGCGGTTTCACTGAATTAAAATTTTGA
Upstream 100 bases:
>100_bases CCGTCCTTTAGAGTGCAAGATGCAAGTGCATAGCTGTTAGGCTATATTCAAGCTAAAAGAGGTTAAAATACCACCAGTCT TTTTGGGATAGGAAATATCC
Downstream 100 bases:
>100_bases AATGAGGAGCTATTGGTGCGTCGGATTGTAGTAACTGGAATGGGAATGATCAATTCGCTAGGTTTAAATAAAGAAGATTC TTTTTTAGCGATCGCTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 35; Mature: 35
Protein sequence:
>35_residues MQTIKNKAFRVSIQWNALVRKPLALERGGFTELKF
Sequences:
>Translated_35_residues MQTIKNKAFRVSIQWNALVRKPLALERGGFTELKF >Mature_35_residues MQTIKNKAFRVSIQWNALVRKPLALERGGFTELKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4092; Mature: 4092
Theoretical pI: Translated: 11.72; Mature: 11.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIKNKAFRVSIQWNALVRKPLALERGGFTELKF CCCCCCCEEEEEEEECCEECCCEECCCCCEEEECC >Mature Secondary Structure MQTIKNKAFRVSIQWNALVRKPLALERGGFTELKF CCCCCCCEEEEEEEECCEECCCEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA