Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527575

Identifier: 188527575

GI number: 188527575

Start: 778264

End: 780291

Strand: Direct

Name: 188527575

Synonym: HPSH_03985

Alternate gene names: NA

Gene position: 778264-780291 (Clockwise)

Preceding gene: 188527574

Following gene: 188527576

Centisome position: 48.38

GC content: 36.59

Gene sequence:

>2028_bases
ATGAAATCCCTATCCCATGCCCTTTTTTCGCTCTTTTTAAAAGGTTTTTATTTCACCTTTTTTATGAGTTTGTTGTTTGT
GTTTAATCGTATCGGCTTTATCCTTTATACTGGCTATTATAAGCATGCTTTAAAAAACCCTATTTTTGATGAAATCATCA
AAACCCTATTCAATGGAGCAAGATACGATAATCGTGTGGTCTCAAGCCTGGCGATTCTTTTTATCATCATCGGGTTATTA
GGGTTATTTGCCCCTAAACACCAAACCAAAATGCTTAATATTACGGCGTATTTTTCTATCGCTATTATCCTGTTTTTAAA
CATTGCAAACATTGTTTATTATGGTATTTATGGGAATGTGTTTGATGAAAATTTATTGGAATTTTTGCATGAAGACACGC
TCACGATTTTAAAAATGAGCGGGGAATACCCTATTTTTTCCAGTTTTTCACTCTTTGTGATTCTTAGCGTTTTAATCTCT
TTTATTTATTTCAAACTCCAAAACGCCCTTTTTAAACCCAATGTTTATCAAGCCACCAAACCCCTTAAAACTTTCATTTT
ATTTGCGCTTTTTTCGCTCACGCAAATGTTTTACATTAACGCGCAATTGAGCTTTGTTGGCGCGTCTTTAGATCTCAGCA
TAGAGCCAGCCAAAGATCCTTTTTTAATGAAAATCACCCCCGGTGCGTTTCGCAACCTTTATCTTTTGGCACGCAATTAC
AGACAAAGCCACAACCTTAAATTCAGCGATTTTGCTAAAGGATCGCCCCTAGAAGTGGCGAAAAATTATTTCAATCTTAA
AGAAAACCCCTCAAACAACCTCTATGAGTTGCTAACTCAAACAAGCCGCAACAATTCCAATCAAACCATTCAACATGTTT
TTTATATCGTTTCAGAGTCTTTGAGTTCATGGCATTTTGATCCAAAATTTGACGCCATAGGGCTAACGAGCGCTTTACAA
GATTTGGTTAAAAAAGAGCATGCCTATATGCTTTCTGCTTTTATTGAAAGCGCCCCACGAACCGTTAAAAGCCTAGATGT
CCAAATCACAGGCTTGCCTTATATCAATGATAATAATTTAGTCAATTCAGGAGTGATTCTTCCTAGCTTTCCTATGGCGA
TTGGCAATATCACAAAAACCCTGGGTTATAAAAACAACTTTTATTATGGGGGTAGCGGGATTTGGAACAAACTAACTAGT
TTCACCAAAAAACAAGGTTTTCACGCCCTTTATTTCAATAACCACCTCTTAGAATTTGCCAAAAACAAGCCCTACCCTAA
GCCCATAGAGAGCAACTGGGGAGTGCATGATAATATTTTATTTGACTATATTTTAGAAAACACCAACCCCAATGAAAAAA
CTTTCAGCATGGTCATGACTTTAAGCAACCACGCGATCAAAAATGTGAATCTCAAAGCCTTTGGCGTGCCTTTAGAAAAA
ATCCAAAAATTTGTGGAAAAAACCCCCAAATCAGAAAATCTACCGGACGCTAATTCTTTAGGGCATATTTATTGGTATGA
CAAAGTAATAGTCAATTTCATCCAAAAAGCCAGCCAAAAATTCCCTAATTCGCTTTTTATCATCACAGGGGATCATTTTG
ACAGGAGCTATGAATACGCTAAAAACGATTTATATACGATTAAATCCGTGCCGCTTATTTTGTTCGCCCCTACTTTAAAG
CCTGAAAAAATCAGTCAAGTCGGATCGCATTTAGACATCGCCCCTACGATTGTTGAATTAATCGCTCCTAAAGGTTTTCA
ATTTGTGAGTTTTGGCAAGCCTTTATTTTCTAACAATACAACAAACCCTCCAAGCCACCCCAATTACGCGCTAGGTTATG
AAGCGATCGCTACCAAAGATTATTTTTATAACCCCAGTTTGGGGTTAAGGTATTTGAATGAAAATTACAAAGAACAAAAG
GATGAACAAAGCGACAAAATAAAAGCTTCTGAGTTTTACCAGCAATTAGAATCCTTAAAAGCTCTCAGTTATTACTTGCT
CTATCATGGGGCTAATCTTAAAGATTGA

Upstream 100 bases:

>100_bases
CTAATTTTCAAATCTTAGATTCTTTATTGGATTTCCCCTTGCTTCTTTTTGTCTTTTTTAAGACTTTATCTCTTGTTAAA
AAAAGGTTGTATTAACGCTC

Downstream 100 bases:

>100_bases
CAAACTGAGTTTTTATCCATTAAACGCATGATTTTTGCTACAATAATAGGATTTTAATGGATAAAGGACAATAAGCATGC
CAAATAGAGGCGTTGTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphoglycerol Transferase; Alkaline Phosphatase; Phosphoglycerol Transferase And Related Proteins; Phosphoglycerol Transferase-Like Protein; Phosphoglycerol Transferase Related Protein; Arylsulfatase; Phosphoglycerol Transferase-Related Protein

Number of amino acids: Translated: 675; Mature: 675

Protein sequence:

>675_residues
MKSLSHALFSLFLKGFYFTFFMSLLFVFNRIGFILYTGYYKHALKNPIFDEIIKTLFNGARYDNRVVSSLAILFIIIGLL
GLFAPKHQTKMLNITAYFSIAIILFLNIANIVYYGIYGNVFDENLLEFLHEDTLTILKMSGEYPIFSSFSLFVILSVLIS
FIYFKLQNALFKPNVYQATKPLKTFILFALFSLTQMFYINAQLSFVGASLDLSIEPAKDPFLMKITPGAFRNLYLLARNY
RQSHNLKFSDFAKGSPLEVAKNYFNLKENPSNNLYELLTQTSRNNSNQTIQHVFYIVSESLSSWHFDPKFDAIGLTSALQ
DLVKKEHAYMLSAFIESAPRTVKSLDVQITGLPYINDNNLVNSGVILPSFPMAIGNITKTLGYKNNFYYGGSGIWNKLTS
FTKKQGFHALYFNNHLLEFAKNKPYPKPIESNWGVHDNILFDYILENTNPNEKTFSMVMTLSNHAIKNVNLKAFGVPLEK
IQKFVEKTPKSENLPDANSLGHIYWYDKVIVNFIQKASQKFPNSLFIITGDHFDRSYEYAKNDLYTIKSVPLILFAPTLK
PEKISQVGSHLDIAPTIVELIAPKGFQFVSFGKPLFSNNTTNPPSHPNYALGYEAIATKDYFYNPSLGLRYLNENYKEQK
DEQSDKIKASEFYQQLESLKALSYYLLYHGANLKD

Sequences:

>Translated_675_residues
MKSLSHALFSLFLKGFYFTFFMSLLFVFNRIGFILYTGYYKHALKNPIFDEIIKTLFNGARYDNRVVSSLAILFIIIGLL
GLFAPKHQTKMLNITAYFSIAIILFLNIANIVYYGIYGNVFDENLLEFLHEDTLTILKMSGEYPIFSSFSLFVILSVLIS
FIYFKLQNALFKPNVYQATKPLKTFILFALFSLTQMFYINAQLSFVGASLDLSIEPAKDPFLMKITPGAFRNLYLLARNY
RQSHNLKFSDFAKGSPLEVAKNYFNLKENPSNNLYELLTQTSRNNSNQTIQHVFYIVSESLSSWHFDPKFDAIGLTSALQ
DLVKKEHAYMLSAFIESAPRTVKSLDVQITGLPYINDNNLVNSGVILPSFPMAIGNITKTLGYKNNFYYGGSGIWNKLTS
FTKKQGFHALYFNNHLLEFAKNKPYPKPIESNWGVHDNILFDYILENTNPNEKTFSMVMTLSNHAIKNVNLKAFGVPLEK
IQKFVEKTPKSENLPDANSLGHIYWYDKVIVNFIQKASQKFPNSLFIITGDHFDRSYEYAKNDLYTIKSVPLILFAPTLK
PEKISQVGSHLDIAPTIVELIAPKGFQFVSFGKPLFSNNTTNPPSHPNYALGYEAIATKDYFYNPSLGLRYLNENYKEQK
DEQSDKIKASEFYQQLESLKALSYYLLYHGANLKD
>Mature_675_residues
MKSLSHALFSLFLKGFYFTFFMSLLFVFNRIGFILYTGYYKHALKNPIFDEIIKTLFNGARYDNRVVSSLAILFIIIGLL
GLFAPKHQTKMLNITAYFSIAIILFLNIANIVYYGIYGNVFDENLLEFLHEDTLTILKMSGEYPIFSSFSLFVILSVLIS
FIYFKLQNALFKPNVYQATKPLKTFILFALFSLTQMFYINAQLSFVGASLDLSIEPAKDPFLMKITPGAFRNLYLLARNY
RQSHNLKFSDFAKGSPLEVAKNYFNLKENPSNNLYELLTQTSRNNSNQTIQHVFYIVSESLSSWHFDPKFDAIGLTSALQ
DLVKKEHAYMLSAFIESAPRTVKSLDVQITGLPYINDNNLVNSGVILPSFPMAIGNITKTLGYKNNFYYGGSGIWNKLTS
FTKKQGFHALYFNNHLLEFAKNKPYPKPIESNWGVHDNILFDYILENTNPNEKTFSMVMTLSNHAIKNVNLKAFGVPLEK
IQKFVEKTPKSENLPDANSLGHIYWYDKVIVNFIQKASQKFPNSLFIITGDHFDRSYEYAKNDLYTIKSVPLILFAPTLK
PEKISQVGSHLDIAPTIVELIAPKGFQFVSFGKPLFSNNTTNPPSHPNYALGYEAIATKDYFYNPSLGLRYLNENYKEQK
DEQSDKIKASEFYQQLESLKALSYYLLYHGANLKD

Specific function: Unknown

COG id: COG1368

COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77252; Mature: 77252

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLSHALFSLFLKGFYFTFFMSLLFVFNRIGFILYTGYYKHALKNPIFDEIIKTLFNGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCHHHHHHHHHHCCC
RYDNRVVSSLAILFIIIGLLGLFAPKHQTKMLNITAYFSIAIILFLNIANIVYYGIYGNV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHEECCCCCH
FDENLLEFLHEDTLTILKMSGEYPIFSSFSLFVILSVLISFIYFKLQNALFKPNVYQATK
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
PLKTFILFALFSLTQMFYINAQLSFVGASLDLSIEPAKDPFLMKITPGAFRNLYLLARNY
HHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHH
RQSHNLKFSDFAKGSPLEVAKNYFNLKENPSNNLYELLTQTSRNNSNQTIQHVFYIVSES
HHHCCCCCHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LSSWHFDPKFDAIGLTSALQDLVKKEHAYMLSAFIESAPRTVKSLDVQITGLPYINDNNL
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEECCEECCCCC
VNSGVILPSFPMAIGNITKTLGYKNNFYYGGSGIWNKLTSFTKKQGFHALYFNNHLLEFA
CCCCEECCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHH
KNKPYPKPIESNWGVHDNILFDYILENTNPNEKTFSMVMTLSNHAIKNVNLKAFGVPLEK
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHH
IQKFVEKTPKSENLPDANSLGHIYWYDKVIVNFIQKASQKFPNSLFIITGDHFDRSYEYA
HHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHH
KNDLYTIKSVPLILFAPTLKPEKISQVGSHLDIAPTIVELIAPKGFQFVSFGKPLFSNNT
CCCEEEEECCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCHHCCCC
TNPPSHPNYALGYEAIATKDYFYNPSLGLRYLNENYKEQKDEQSDKIKASEFYQQLESLK
CCCCCCCCCCCCHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ALSYYLLYHGANLKD
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MKSLSHALFSLFLKGFYFTFFMSLLFVFNRIGFILYTGYYKHALKNPIFDEIIKTLFNGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCHHHHHHHHHHCCC
RYDNRVVSSLAILFIIIGLLGLFAPKHQTKMLNITAYFSIAIILFLNIANIVYYGIYGNV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHEECCCCCH
FDENLLEFLHEDTLTILKMSGEYPIFSSFSLFVILSVLISFIYFKLQNALFKPNVYQATK
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
PLKTFILFALFSLTQMFYINAQLSFVGASLDLSIEPAKDPFLMKITPGAFRNLYLLARNY
HHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHH
RQSHNLKFSDFAKGSPLEVAKNYFNLKENPSNNLYELLTQTSRNNSNQTIQHVFYIVSES
HHHCCCCCHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LSSWHFDPKFDAIGLTSALQDLVKKEHAYMLSAFIESAPRTVKSLDVQITGLPYINDNNL
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEECCEECCCCC
VNSGVILPSFPMAIGNITKTLGYKNNFYYGGSGIWNKLTSFTKKQGFHALYFNNHLLEFA
CCCCEECCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHH
KNKPYPKPIESNWGVHDNILFDYILENTNPNEKTFSMVMTLSNHAIKNVNLKAFGVPLEK
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHH
IQKFVEKTPKSENLPDANSLGHIYWYDKVIVNFIQKASQKFPNSLFIITGDHFDRSYEYA
HHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHH
KNDLYTIKSVPLILFAPTLKPEKISQVGSHLDIAPTIVELIAPKGFQFVSFGKPLFSNNT
CCCEEEEECCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCHHCCCC
TNPPSHPNYALGYEAIATKDYFYNPSLGLRYLNENYKEQKDEQSDKIKASEFYQQLESLK
CCCCCCCCCCCCHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ALSYYLLYHGANLKD
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA