Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is yjeE [C]

Identifier: 188527439

GI number: 188527439

Start: 621570

End: 621971

Strand: Direct

Name: yjeE [C]

Synonym: HPSH_03285

Alternate gene names: 188527439

Gene position: 621570-621971 (Clockwise)

Preceding gene: 188527438

Following gene: 188527440

Centisome position: 38.64

GC content: 40.05

Gene sequence:

>402_bases
ATGAGAGCGCATTTAGACGAGTTAGACAAAGTGGCTGCTGCAATTTTAAAAGATGATTTTAAGGGGGTGGTGCTTTTAAA
AGGCGTTGTGGGGAGCGGTAAAACGACTTTGGTTCAAGCGTGCTTGAAACACTTGGGTTTAGACATTCAAGCGACTTCGC
CCACCTTTAGCCTGATGCATGCTTATAGCGAGAGCGTGTTCCATTATGATTTTTACATGCGCGATTTAGAGGCTTGCTTG
GAGCTTGGCATGTTAGAGTGCTTGTTGGAAAAGGGGATCCATTTTGTGGAATGGGGCGATGAAAAATTAGAAAAAATTTT
AAAAAAATACGATTTAGCTATTAAGGTTGTGGAAATTAAAACCGAATTAACCAGCCGTTTTTATACAATAAAGATCGCTT
AA

Upstream 100 bases:

>100_bases
CAAAAGAAACCCCTACAGCCTTGCAAGAATTCATGGCTAACCATTCCGATCTCATTGAAGAGATTAGGAGCGAGTTTGAA
ATCAAAAGCGTGGAATTGTT

Downstream 100 bases:

>100_bases
AGGGTCGCTTGAATGGATATTTTAAAAGCAGAGCATTTAAACAAACAGATTAAAAAAACCAAAATCGTTTCAGATGTTTC
TTTAGAAGTGAAAAGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MRAHLDELDKVAAAILKDDFKGVVLLKGVVGSGKTTLVQACLKHLGLDIQATSPTFSLMHAYSESVFHYDFYMRDLEACL
ELGMLECLLEKGIHFVEWGDEKLEKILKKYDLAIKVVEIKTELTSRFYTIKIA

Sequences:

>Translated_133_residues
MRAHLDELDKVAAAILKDDFKGVVLLKGVVGSGKTTLVQACLKHLGLDIQATSPTFSLMHAYSESVFHYDFYMRDLEACL
ELGMLECLLEKGIHFVEWGDEKLEKILKKYDLAIKVVEIKTELTSRFYTIKIA
>Mature_133_residues
MRAHLDELDKVAAAILKDDFKGVVLLKGVVGSGKTTLVQACLKHLGLDIQATSPTFSLMHAYSESVFHYDFYMRDLEACL
ELGMLECLLEKGIHFVEWGDEKLEKILKKYDLAIKVVEIKTELTSRFYTIKIA

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15053; Mature: 15053

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAHLDELDKVAAAILKDDFKGVVLLKGVVGSGKTTLVQACLKHLGLDIQATSPTFSLMH
CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCHHHHHH
AYSESVFHYDFYMRDLEACLELGMLECLLEKGIHFVEWGDEKLEKILKKYDLAIKVVEIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHEEEHHH
TELTSRFYTIKIA
HHHHCCEEEEEEC
>Mature Secondary Structure
MRAHLDELDKVAAAILKDDFKGVVLLKGVVGSGKTTLVQACLKHLGLDIQATSPTFSLMH
CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCHHHHHH
AYSESVFHYDFYMRDLEACLELGMLECLLEKGIHFVEWGDEKLEKILKKYDLAIKVVEIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHEEEHHH
TELTSRFYTIKIA
HHHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA