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The map label for this gene is 188527411

Identifier: 188527411

GI number: 188527411

Start: 592318

End: 593565

Strand: Reverse

Name: 188527411

Synonym: HPSH_03100

Alternate gene names: NA

Gene position: 593565-592318 (Counterclockwise)

Preceding gene: 188527412

Following gene: 188527410

Centisome position: 36.9

GC content: 40.62

Gene sequence:

>1248_bases
ATGAAGAAAAAATACTTCACGCTTTTATTGCAAAGTAGTGTGGTATTAGCGGTTTTTATAGGGTGTTCTTCTACCAGGAA
TCATACTTTTTCAGCCCTTAGTAATCAAGAAAATACAGACACTAATCTTCCGGTAGTCCATTCTGTTAAAACGATTAACG
ATGTGAGTTCAGTGGGTTTTGAATGGCCTAAAATCGCTGATACTTATGATATTGATGGGTTTATTTTGTATCGTTTGAAA
AAAGACTCCAAGCTTAAAAGAATCGCCATGATTAAAAACCCTTATGCGACCCACTATTATGATGAAGGACTAGAAACAGA
GAGTTCCTACACTTACCAACTCGCTACTTACAAGGGCGATAAAATCTCTAAACTTTCAGAACCCATTTTAGTGAAAACCT
CTTTTATCAATCCCGTAGAAAGCGTGTTTGCAAGCCTTGAATACCCTAAAAGCGTGAAAGTCTTTTGGAGCCCCCACCCT
AACCCTAGCGTTTCTAAATACATCATCCAAAGGCAGAATAAAGACGGCAAATTTGTTAGCGTAGGGGCTGTTAGGAACCG
CTTGTTTGTGGAGTTTTTTGATAAAGATTTAGAAGATGGGAAAAAATACCGCTACCAAGTCATCGCCGAAAATTTCATGG
GGGATAAATCCAGGCCTAGCGTCATAGTAGAAGGGAAAACCAAAGATTTACCCAAAGAAATCGCTAATGTTAGAGTGAGC
CAAAACCTCACCCGACACATTGAATTGAGTTGGGATAAATCCCCTGAAGAAGATGTGATAGCTTATCGCATTTACGCTTC
CAATAACCGCAACGATAAATACAAATTCATCGCTCAAACCACCAACACTTCCTATGTGGATAAAATAGAAAAAGACAATC
TCACTCGTTATTATAAAGTCGTCGCCCTTGATAAAACGCATCTTGAAGGGGCATTACCCAAAGATCCTGCAATGGGTGAG
ACCGCTGATAGGCCCGAAGCCCCTATCATCACTAAAGGGACTATTCAAGACTCTTCAGCCCTCATTCAATGGGAAAATAA
CCCAAGCGCTAAAATAGCCACTTATGCGGTGTATCGTTTTGAAGCCAACTCTAAAACCCCTTTACGCTTTGGGAATATCA
CCAAAAACCAATTCGTGGATAAGGACATGAAAGTGGGCGTGTCTTATCGCTACCAAGTGGTGAGCGTGGATAAAGATGGT
TTAGAGTCGCACCCAAGCAAAGAAGTGCGTTTGTTTTTAGAGCGCTAA

Upstream 100 bases:

>100_bases
AGAAGCGAGCAAAAACTGCGCTTTAAAGTTCCCCTGTTAAAGGATATGTTAGAATACCTTAAAAAAGTTTTTGACAAGGA
GAATTTAGATGAGGTCTTGG

Downstream 100 bases:

>100_bases
AAGGGTTTTAATGCCCCATTTTTTAGCCAAGCTGGATTTTAAACCTTTAGAGTACCCCTTAATTGAAGGGGATTTTTGTT
TTCATAGGGAATTTTTAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Fibronectin Type III Domain-Containing Protein; Fibronectin Type III Domain Protein; Fibronectin Type III; Diaminopimelate Decarboxylase Dap Decarboxylase; Fibronectin Domain Containing Protein

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDTNLPVVHSVKTINDVSSVGFEWPKIADTYDIDGFILYRLK
KDSKLKRIAMIKNPYATHYYDEGLETESSYTYQLATYKGDKISKLSEPILVKTSFINPVESVFASLEYPKSVKVFWSPHP
NPSVSKYIIQRQNKDGKFVSVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEIANVRVS
QNLTRHIELSWDKSPEEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVALDKTHLEGALPKDPAMGE
TADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVSYRYQVVSVDKDG
LESHPSKEVRLFLER

Sequences:

>Translated_415_residues
MKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDTNLPVVHSVKTINDVSSVGFEWPKIADTYDIDGFILYRLK
KDSKLKRIAMIKNPYATHYYDEGLETESSYTYQLATYKGDKISKLSEPILVKTSFINPVESVFASLEYPKSVKVFWSPHP
NPSVSKYIIQRQNKDGKFVSVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEIANVRVS
QNLTRHIELSWDKSPEEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVALDKTHLEGALPKDPAMGE
TADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVSYRYQVVSVDKDG
LESHPSKEVRLFLER
>Mature_415_residues
MKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDTNLPVVHSVKTINDVSSVGFEWPKIADTYDIDGFILYRLK
KDSKLKRIAMIKNPYATHYYDEGLETESSYTYQLATYKGDKISKLSEPILVKTSFINPVESVFASLEYPKSVKVFWSPHP
NPSVSKYIIQRQNKDGKFVSVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEIANVRVS
QNLTRHIELSWDKSPEEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVALDKTHLEGALPKDPAMGE
TADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVSYRYQVVSVDKDG
LESHPSKEVRLFLER

Specific function: Unknown

COG id: COG3401

COG function: function code R; Fibronectin type 3 domain-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47455; Mature: 47455

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDTNLPVVHSVKTINDVSSVGF
CCCCEEEEEHHCCEEEEEEECCCCCCCCEEHHHCCCCCCCCCCCEEEEHHHHHHHHHCCC
EWPKIADTYDIDGFILYRLKKDSKLKRIAMIKNPYATHYYDEGLETESSYTYQLATYKGD
CCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCEECCCCCCCCCEEEEEEEECCC
KISKLSEPILVKTSFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQNKDGKFVS
HHHHCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHEECCCCCCEEE
VGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEIANVRVS
EEHHHHHHHHHHHHCCHHCCHHEEHEEEEHHHCCCCCCCCEEEECCCCCHHHHHHHEEHH
QNLTRHIELSWDKSPEEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKV
CCCEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEECCCHHHHHHCCCCCEEEEEE
VALDKTHLEGALPKDPAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRF
EEEECHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCEEEEEEEEEE
EANSKTPLRFGNITKNQFVDKDMKVGVSYRYQVVSVDKDGLESHPSKEVRLFLER
ECCCCCCEEECCCCHHHHCCCHHEECEEEEEEEEEECCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDTNLPVVHSVKTINDVSSVGF
CCCCEEEEEHHCCEEEEEEECCCCCCCCEEHHHCCCCCCCCCCCEEEEHHHHHHHHHCCC
EWPKIADTYDIDGFILYRLKKDSKLKRIAMIKNPYATHYYDEGLETESSYTYQLATYKGD
CCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCEECCCCCCCCCEEEEEEEECCC
KISKLSEPILVKTSFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQNKDGKFVS
HHHHCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHEECCCCCCEEE
VGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEIANVRVS
EEHHHHHHHHHHHHCCHHCCHHEEHEEEEHHHCCCCCCCCEEEECCCCCHHHHHHHEEHH
QNLTRHIELSWDKSPEEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKV
CCCEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEECCCHHHHHHCCCCCEEEEEE
VALDKTHLEGALPKDPAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRF
EEEECHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCEEEEEEEEEE
EANSKTPLRFGNITKNQFVDKDMKVGVSYRYQVVSVDKDGLESHPSKEVRLFLER
ECCCCCCEEECCCCHHHHCCCHHEECEEEEEEEEEECCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA