Click here to switch to the map view.

The map label for this gene is ftsY [H]

Identifier: 188527393

GI number: 188527393

Start: 577044

End: 577937

Strand: Reverse

Name: ftsY [H]

Synonym: HPSH_03010

Alternate gene names: 188527393

Gene position: 577937-577044 (Counterclockwise)

Preceding gene: 188527394

Following gene: 188527387

Centisome position: 35.93

GC content: 41.05

Gene sequence:

>894_bases
ATGTTTAATTTTTTCAAAAAAATTGTCAATAAAATTAAGGGTGAAGAGGTTAAAGAAGAGGCTAAAGAGAAAAAGCGCCA
AAGCGTTCCTAAAGAGGAATTAGAAGAAATTTTGATTGGCTTTGACATCCAATACGATTTGATAGAAAGCTTGTTAAATC
ATTTAGGCGATTTAATCACGCCCAAGCAATTAGAAGTCGCTTTGTTGCGTTTCGTGCGTGGGGAAAGCTATTATGATAAA
ACACGCCTAAAAACTATCACCACAAAACCCTTAGTGCATCTCATCGTGGGGGTTAATGGGGCGGGTAAAACCACAACGAT
CGCTAAACTCGCCAAGCTCTCTTTAAAACAGCATAAAAAAGCGCTTTTAGGGGCAGGCGATACTTTTAGAGCGGCTGCAG
TCAAACAGCTCCAGCTATGGGGCGAAAAGCTTAACATTCAAGTCATTAGCGCTAAAGAAGGGAGCGATCCAAGCTCTCTA
GCTTATAACACCATAGAAAGCGCGATCGCTAAAAATATAGATGAAGTTTTTATAGACACCGCCGGGAGGTTACACAACCA
AACCAACCTTAAAAACGAGCTTTCTAAAATCGCGCGCACCTGCTCTAAAGTCTTAAAAGACGCCCCCTTTTATAAATTCC
TTATTTTAGACGGCACGCAAGGGAGTTCTGGACTCACTCAAGCCAAGATTTTCCATGAGACTTTGGCGTTAGACGGCGTG
ATTATGACTAAGCTTGATGGCACTTCTAAAGGCGGAGCGATTTTAAGCGTGCTGTATGAGTTGAAATTACCCATTCTTTA
TTTAGGAATGGGCGAAAAAGAAGACGATTTGATCGCTTTTGATGAAGAACGCTTTATAGAAGACTTGGTTGATGCGGTGT
TTGTGGAACAATAA

Upstream 100 bases:

>100_bases
GCTCTTATACTACAAACACCAATTGATCAAAATGTATCAGGGGATCGTGCCAATAGAAATGCTCCAATTTGATATTTCCA
ATTTAAAGGATTAAAAAACC

Downstream 100 bases:

>100_bases
TTCTAATATTATTGAACAATAACCCTAAAGCTCTTATCCATATGGTTTGCTTCTTGCAAAGCGTTGCAAACCTCTGCGTT
TTTGGCATAAAACTCCTTCA

Product: cell division protein (ftsY)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MFNFFKKIVNKIKGEEVKEEAKEKKRQSVPKEELEEILIGFDIQYDLIESLLNHLGDLITPKQLEVALLRFVRGESYYDK
TRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNIQVISAKEGSDPSSL
AYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGV
IMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIEDLVDAVFVEQ

Sequences:

>Translated_297_residues
MFNFFKKIVNKIKGEEVKEEAKEKKRQSVPKEELEEILIGFDIQYDLIESLLNHLGDLITPKQLEVALLRFVRGESYYDK
TRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNIQVISAKEGSDPSSL
AYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGV
IMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIEDLVDAVFVEQ
>Mature_297_residues
MFNFFKKIVNKIKGEEVKEEAKEKKRQSVPKEELEEILIGFDIQYDLIESLLNHLGDLITPKQLEVALLRFVRGESYYDK
TRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNIQVISAKEGSDPSSL
AYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGV
IMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIEDLVDAVFVEQ

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=199, Percent_Identity=34.1708542713568, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4507215, Length=199, Percent_Identity=34.1708542713568, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI23308697, Length=314, Percent_Identity=26.4331210191083, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI295424842, Length=314, Percent_Identity=26.4331210191083, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=31.8518518518519, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1789874, Length=200, Percent_Identity=50, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1788963, Length=230, Percent_Identity=33.0434782608696, Blast_Score=125, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17539958, Length=199, Percent_Identity=30.6532663316583, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI193206261, Length=280, Percent_Identity=30.7142857142857, Blast_Score=96, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6325345, Length=197, Percent_Identity=32.994923857868, Blast_Score=105, Evalue=9e-24,
Organism=Saccharomyces cerevisiae, GI6320498, Length=258, Percent_Identity=30.6201550387597, Blast_Score=88, Evalue=1e-18,
Organism=Drosophila melanogaster, GI17647949, Length=207, Percent_Identity=32.3671497584541, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24641198, Length=226, Percent_Identity=28.3185840707965, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 33055; Mature: 33055

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNFFKKIVNKIKGEEVKEEAKEKKRQSVPKEELEEILIGFDIQYDLIESLLNHLGDLIT
CCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PKQLEVALLRFVRGESYYDKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKK
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHH
ALLGAGDTFRAAAVKQLQLWGEKLNIQVISAKEGSDPSSLAYNTIESAIAKNIDEVFIDT
HHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGV
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCE
IMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIEDLVDAVFVEQ
EEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFNFFKKIVNKIKGEEVKEEAKEKKRQSVPKEELEEILIGFDIQYDLIESLLNHLGDLIT
CCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PKQLEVALLRFVRGESYYDKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKK
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHH
ALLGAGDTFRAAAVKQLQLWGEKLNIQVISAKEGSDPSSLAYNTIESAIAKNIDEVFIDT
HHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGV
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCE
IMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIEDLVDAVFVEQ
EEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]