Click here to switch to the map view.

The map label for this gene is 188527389

Identifier: 188527389

GI number: 188527389

Start: 574528

End: 574854

Strand: Direct

Name: 188527389

Synonym: HPSH_02990

Alternate gene names: NA

Gene position: 574528-574854 (Clockwise)

Preceding gene: 188527388

Following gene: 188527390

Centisome position: 35.72

GC content: 37.0

Gene sequence:

>327_bases
ATGTCAATGCTCAAAATATCCTTATGGAAAATGGGAAGAGATTGGAGCAATATGACAATCTTTCTGTGGATAAAAAAAGC
TCAGATCGGAGAGCGTTTCCCAGAGTATGCCACGCCTAATAAAAACCATGAACTCGTTGATTATGTCATGGTGGATAGAA
ATGGGAATGTCATTCCTGGCACGCTCACGCAGAGTAAATTTGTGGGCAGAAATGGTGCGGAGTGTTTTGAAAAATTCTTA
TCTAAAGATTATGAGAAATATTTTGAAAATGGTATAAGAATGGAAATCCCTAAGGATTTTTTTTGGGTATTTTCAAAAAA
GGGCTGA

Upstream 100 bases:

>100_bases
AAATTAGAAGAGATCTCAAAAAGGAAGATAAACCCTAATTATATTAATCAAAATATCAACCAACAAGCGGGCTCTTCTGC
GGAACACAAAGAGCAAGCCC

Downstream 100 bases:

>100_bases
TATTAAGATCAAAAGTTTGGAATCTCAGATCGCCAAGCAAAAGAGTTTTGGTGATTTCCAAAAAGTCGACAAGCTAGAAA
AAAAGCTCCAAAAATGCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSMLKISLWKMGRDWSNMTIFLWIKKAQIGERFPEYATPNKNHELVDYVMVDRNGNVIPGTLTQSKFVGRNGAECFEKFL
SKDYEKYFENGIRMEIPKDFFWVFSKKG

Sequences:

>Translated_108_residues
MSMLKISLWKMGRDWSNMTIFLWIKKAQIGERFPEYATPNKNHELVDYVMVDRNGNVIPGTLTQSKFVGRNGAECFEKFL
SKDYEKYFENGIRMEIPKDFFWVFSKKG
>Mature_107_residues
SMLKISLWKMGRDWSNMTIFLWIKKAQIGERFPEYATPNKNHELVDYVMVDRNGNVIPGTLTQSKFVGRNGAECFEKFLS
KDYEKYFENGIRMEIPKDFFWVFSKKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12801; Mature: 12670

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLKISLWKMGRDWSNMTIFLWIKKAQIGERFPEYATPNKNHELVDYVMVDRNGNVIPG
CCCEEEEHHHCCCCCCCCEEEEEEECCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCC
TLTQSKFVGRNGAECFEKFLSKDYEKYFENGIRMEIPKDFFWVFSKKG
CCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCC
>Mature Secondary Structure 
SMLKISLWKMGRDWSNMTIFLWIKKAQIGERFPEYATPNKNHELVDYVMVDRNGNVIPG
CCEEEEHHHCCCCCCCCEEEEEEECCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCC
TLTQSKFVGRNGAECFEKFLSKDYEKYFENGIRMEIPKDFFWVFSKKG
CCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA