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The map label for this gene is lolA

Identifier: 188527370

GI number: 188527370

Start: 555085

End: 555666

Strand: Direct

Name: lolA

Synonym: HPSH_02885

Alternate gene names: 188527370

Gene position: 555085-555666 (Clockwise)

Preceding gene: 188527366

Following gene: 188527372

Centisome position: 34.51

GC content: 33.68

Gene sequence:

>582_bases
ATGAGAGATGATTTTAAGGTTTGGATAATGAAAGCTTTTTTAAAGATTTTAATGGTTTTGATTTTTATGGGCGTTGCTTA
CGCTAAAAATCCTTCAACGCTTTCTAAAGAAGAAGAGGTTTTGCAGCATTTGCAAAGTTTTAGCGCGAATTTCAAGCAGG
TTTTAAAAAATGAAAAACCCTTAGTTTATTACGGGGTTTTAAAGGCTAAAGCCCCTAATTGGGCTTTATGGGTTTATGAA
AAGCCTTTAAAAAAAGAAATTTACATGAACGATAAAGAAGTGGTAATTTATGAGCCTAATTTGTTTCAAGCGACTATCAC
GCCCTTAAAAGACAAGACGGATTTTTTCACCATTCTCAAGCGTTTAAAAAAGCAAGATGACGGCTCTTTTAAAACGACTA
TCAACAAAACCACTTATCGTTTGGTTTTCAAAGACGGCAAGCCTTTTTCGTTGGAATTTAAAGATGACATGAACCATCTT
GTAACGATCACTTTTTCTCAAACAGAAATTAACCCCACCATTGCTAATGAAATCTTTGTTTTTAAGCCTAAAGATGAAAA
CATTGATATTGTACGCCAATGA

Upstream 100 bases:

>100_bases
AGAGTGCTTTAATCCCATTTATTTTATTAAAGCGTCAGTTTTTAATCCCATTTTAGCATGGATAAAATAAAAGTCATGTA
AAATAAAGGGTTTTATTGAG

Downstream 100 bases:

>100_bases
TTTTTGATGACTCATTGCATTTTGTTAGCAAAAGTTGGCTAAAATAGACAAGCTTTTAAAATTATGGGGCTGACTTGGAT
TTCGACAGATTTCTTGTCGC

Product: outer-membrane lipoprotein carrier protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRDDFKVWIMKAFLKILMVLIFMGVAYAKNPSTLSKEEEVLQHLQSFSANFKQVLKNEKPLVYYGVLKAKAPNWALWVYE
KPLKKEIYMNDKEVVIYEPNLFQATITPLKDKTDFFTILKRLKKQDDGSFKTTINKTTYRLVFKDGKPFSLEFKDDMNHL
VTITFSQTEINPTIANEIFVFKPKDENIDIVRQ

Sequences:

>Translated_193_residues
MRDDFKVWIMKAFLKILMVLIFMGVAYAKNPSTLSKEEEVLQHLQSFSANFKQVLKNEKPLVYYGVLKAKAPNWALWVYE
KPLKKEIYMNDKEVVIYEPNLFQATITPLKDKTDFFTILKRLKKQDDGSFKTTINKTTYRLVFKDGKPFSLEFKDDMNHL
VTITFSQTEINPTIANEIFVFKPKDENIDIVRQ
>Mature_193_residues
MRDDFKVWIMKAFLKILMVLIFMGVAYAKNPSTLSKEEEVLQHLQSFSANFKQVLKNEKPLVYYGVLKAKAPNWALWVYE
KPLKKEIYMNDKEVVIYEPNLFQATITPLKDKTDFFTILKRLKKQDDGSFKTTINKTTYRLVFKDGKPFSLEFKDDMNHL
VTITFSQTEINPTIANEIFVFKPKDENIDIVRQ

Specific function: Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the l

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564
- InterPro:   IPR018323 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 22703; Mature: 22703

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDDFKVWIMKAFLKILMVLIFMGVAYAKNPSTLSKEEEVLQHLQSFSANFKQVLKNEKP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
LVYYGVLKAKAPNWALWVYEKPLKKEIYMNDKEVVIYEPNLFQATITPLKDKTDFFTILK
EEEEEEEEECCCCEEEEEECCCCCHHHEECCCEEEEECCCCEEEEECCCCCCHHHHHHHH
RLKKQDDGSFKTTINKTTYRLVFKDGKPFSLEFKDDMNHLVTITFSQTEINPTIANEIFV
HHHCCCCCCEEEEECCEEEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCEECCEEEE
FKPKDENIDIVRQ
ECCCCCCEEEEEC
>Mature Secondary Structure
MRDDFKVWIMKAFLKILMVLIFMGVAYAKNPSTLSKEEEVLQHLQSFSANFKQVLKNEKP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
LVYYGVLKAKAPNWALWVYEKPLKKEIYMNDKEVVIYEPNLFQATITPLKDKTDFFTILK
EEEEEEEEECCCCEEEEEECCCCCHHHEECCCEEEEECCCCEEEEECCCCCCHHHHHHHH
RLKKQDDGSFKTTINKTTYRLVFKDGKPFSLEFKDDMNHLVTITFSQTEINPTIANEIFV
HHHCCCCCCEEEEECCEEEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCEECCEEEE
FKPKDENIDIVRQ
ECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA