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The map label for this gene is ycbL [C]

Identifier: 188527342

GI number: 188527342

Start: 529561

End: 530178

Strand: Reverse

Name: ycbL [C]

Synonym: HPSH_02745

Alternate gene names: 188527342

Gene position: 530178-529561 (Counterclockwise)

Preceding gene: 188527350

Following gene: 188527341

Centisome position: 32.96

GC content: 39.48

Gene sequence:

>618_bases
TTGGAAATTTTAAGGCGAGAATGCGGGGCGGTTGAAGAAAACGCTTATATTGTGAAGCTTTCTAGTGGGATAGATTTTAT
TATTGATCCTGGATTTTCTAGCAGCGAATGGGTGTTAGAAAACGCTAAAAACCCTAAGGCGATTTTAATCACGCATGGGC
ATTATGATCATGTATGGGATAGCGCTCAATTGTCAAAACTCCTTAAAAACACCCCCATTTACGCCCCCAAAGACGATGTG
TTCATGCTAGAAAATGATATTTTCCATTTAGGCATGCCGGTTTTTAGCCCCAATTTCAGCGTGCCTTGCAATAAGGGTTG
CACCACTTTAGAGATAGAAAACACTACCATTAAATATTGGCATTTTCCCGGGCACACGCCCGGTTGCTCTATCATAGAAA
TAGAAGGGGTGATTTTTAGCGGGGATTTTATTTTTTATCGCAGCATTGGCCGTTATGATTTCCCTTATTCTAATGAAAAA
GACATGAAAGAGTCCCTGTTAAGGTTTCAAAATTTAGATTTCCCTAAAGACATAGAGATTTATCCAGGGCATGGGGATAA
GACAAGTTTTTTTGCTGAAAGAGAGCATTCTAAAATTTGGGTTTCAAGGATGGCTTAA

Upstream 100 bases:

>100_bases
CAACAATAGAAGCGCTATTCTAGTCAAAATCGCCTTATTTTTGCGCTATGATATTCAATGATAATGACTTTTTAAGCTAA
GTTTGAAGGGAGTTTAAAGT

Downstream 100 bases:

>100_bases
TTGTTAAGCCGGCTAGAAAAGGAGCGTTATTTGCGCCATATCATGCTAGAAGATGTGGGCGAAGAAGGCCAATTGAAGCT
TTTAAAATCTAGCGTTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MEILRRECGAVEENAYIVKLSSGIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKLLKNTPIYAPKDDV
FMLENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEGVIFSGDFIFYRSIGRYDFPYSNEK
DMKESLLRFQNLDFPKDIEIYPGHGDKTSFFAEREHSKIWVSRMA

Sequences:

>Translated_205_residues
MEILRRECGAVEENAYIVKLSSGIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKLLKNTPIYAPKDDV
FMLENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEGVIFSGDFIFYRSIGRYDFPYSNEK
DMKESLLRFQNLDFPKDIEIYPGHGDKTSFFAEREHSKIWVSRMA
>Mature_205_residues
MEILRRECGAVEENAYIVKLSSGIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKLLKNTPIYAPKDDV
FMLENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEGVIFSGDFIFYRSIGRYDFPYSNEK
DMKESLLRFQNLDFPKDIEIYPGHGDKTSFFAEREHSKIWVSRMA

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=194, Percent_Identity=30.4123711340206, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23552; Mature: 23552

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILRRECGAVEENAYIVKLSSGIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWD
CCHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCCEEECCCCCCEEEEECCCCCHHCC
SAQLSKLLKNTPIYAPKDDVFMLENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYW
HHHHHHHHHCCCCCCCCCCEEEEECCEEEECCCEECCCCCCCCCCCCEEEEECCCEEEEE
HFPGHTPGCSIIEIEGVIFSGDFIFYRSIGRYDFPYSNEKDMKESLLRFQNLDFPKDIEI
ECCCCCCCCEEEEEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE
YPGHGDKTSFFAEREHSKIWVSRMA
ECCCCCCCCEEECCCCCEEEEEECC
>Mature Secondary Structure
MEILRRECGAVEENAYIVKLSSGIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWD
CCHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCCEEECCCCCCEEEEECCCCCHHCC
SAQLSKLLKNTPIYAPKDDVFMLENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYW
HHHHHHHHHCCCCCCCCCCEEEEECCEEEECCCEECCCCCCCCCCCCEEEEECCCEEEEE
HFPGHTPGCSIIEIEGVIFSGDFIFYRSIGRYDFPYSNEKDMKESLLRFQNLDFPKDIEI
ECCCCCCCCEEEEEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE
YPGHGDKTSFFAEREHSKIWVSRMA
ECCCCCCCCEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]