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The map label for this gene is srpA [H]

Identifier: 188527272

GI number: 188527272

Start: 460559

End: 461503

Strand: Reverse

Name: srpA [H]

Synonym: HPSH_02395

Alternate gene names: 188527272

Gene position: 461503-460559 (Counterclockwise)

Preceding gene: 188527275

Following gene: 188527271

Centisome position: 28.69

GC content: 39.68

Gene sequence:

>945_bases
ATGAAAAAAATTGGTTTGAGCTTGTGTTTGGTTGTTAGCTTGGGTTTTTTAAAAGCCCATGAAGTGAGCGCTGAAGAGAT
TGCGGATATTTTCTACAAACTCAACGCCAAAGAGCCTAAAATGAAAATCAACCACACTAAGGGGTTTTGCGCTAAAGGCG
TGTTCCTCCCTAACCCGCAAGCAAGAAAGGATTTAGATGTGCCATTACTCAATGAAAAAGAAATCCCTGCATCTGTAAGG
TATTCTTTAGGAGGCGTGGCGATGGATGATAAAAGCAAAGTTAGGGGAATGGCGTTAAAATTAGAAAATCAAAACGCCAG
CTGGACAATGGTGATGCTCAATACAGAAATCAATTTTGCCAAAAACCCTAACGAATTCGCCCAATTTTTTGAGATGAGAA
TCCCTAAAAATGGCAAGGTGGATGAAGCAAGAATCAAAAAGCTTTATGAAGAAGTCCCCTCTTATAGGAATTTTGCCGCT
TACACCAAAACGATAGGGATTAGCTCAAGCGTGGCTAACACGCCCTATTATAGCGTGCATGCGTTCAAGTTTAAAGATAA
GAAAGAAAAATTATTGCCTGCGAGATGGAAATTTGTGCCTAAAGACGGCATCAAGTATCTTAACCCCCAAGAATTAAAGC
AAAAAGATTCAAATTATCTGCTTTCTTCATTCCAACAACACCTTAAAAATAAGCCCATAGAATACCAAATGTATCTGGTG
TTTGCGAATAAAAATGATGCCACCAACGACACAACCGCGCTTTGGAAAGGCAAACACAAGGAATTACTGGTAGGGACATT
GAAGGTTGAAAAATACGAAGGAATGGGTTGCAATAAAGATGTGTATTTCCCAGCCGATCTCCCTAAAGGCGTAGAAGCCC
CTACTGATCCTTTATTCCAAATCAGGAATGAAGTTTATGGGATCACTTTTAATAGGAGGCAATAA

Upstream 100 bases:

>100_bases
CCTAATAAGATATTTAAAAAAGGCTTTTTTAAGGCTCAATAGAGAATTTACTGATACAATAAGGCATTGTTTTATATAAA
AATAATAATAAGGATCAAGA

Downstream 100 bases:

>100_bases
AAAGGCTAAGGCAAATCAAAATATAAGTTGATTGAGAAAATGCGTTTTTATGGGTTTAGGGAAGTGGGATTTTTGTTTAA
AGCTTTTGAGTGTGCCCACT

Product: catalase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKKIGLSLCLVVSLGFLKAHEVSAEEIADIFYKLNAKEPKMKINHTKGFCAKGVFLPNPQARKDLDVPLLNEKEIPASVR
YSLGGVAMDDKSKVRGMALKLENQNASWTMVMLNTEINFAKNPNEFAQFFEMRIPKNGKVDEARIKKLYEEVPSYRNFAA
YTKTIGISSSVANTPYYSVHAFKFKDKKEKLLPARWKFVPKDGIKYLNPQELKQKDSNYLLSSFQQHLKNKPIEYQMYLV
FANKNDATNDTTALWKGKHKELLVGTLKVEKYEGMGCNKDVYFPADLPKGVEAPTDPLFQIRNEVYGITFNRRQ

Sequences:

>Translated_314_residues
MKKIGLSLCLVVSLGFLKAHEVSAEEIADIFYKLNAKEPKMKINHTKGFCAKGVFLPNPQARKDLDVPLLNEKEIPASVR
YSLGGVAMDDKSKVRGMALKLENQNASWTMVMLNTEINFAKNPNEFAQFFEMRIPKNGKVDEARIKKLYEEVPSYRNFAA
YTKTIGISSSVANTPYYSVHAFKFKDKKEKLLPARWKFVPKDGIKYLNPQELKQKDSNYLLSSFQQHLKNKPIEYQMYLV
FANKNDATNDTTALWKGKHKELLVGTLKVEKYEGMGCNKDVYFPADLPKGVEAPTDPLFQIRNEVYGITFNRRQ
>Mature_314_residues
MKKIGLSLCLVVSLGFLKAHEVSAEEIADIFYKLNAKEPKMKINHTKGFCAKGVFLPNPQARKDLDVPLLNEKEIPASVR
YSLGGVAMDDKSKVRGMALKLENQNASWTMVMLNTEINFAKNPNEFAQFFEMRIPKNGKVDEARIKKLYEEVPSYRNFAA
YTKTIGISSSVANTPYYSVHAFKFKDKKEKLLPARWKFVPKDGIKYLNPQELKQKDSNYLLSSFQQHLKNKPIEYQMYLV
FANKNDATNDTTALWKGKHKELLVGTLKVEKYEGMGCNKDVYFPADLPKGVEAPTDPLFQIRNEVYGITFNRRQ

Specific function: Unknown

COG id: COG0753

COG function: function code P; Catalase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the catalase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020835
- InterPro:   IPR018028
- InterPro:   IPR011614 [H]

Pfam domain/function: PF00199 Catalase [H]

EC number: NA

Molecular weight: Translated: 35909; Mature: 35909

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGLSLCLVVSLGFLKAHEVSAEEIADIFYKLNAKEPKMKINHTKGFCAKGVFLPNPQ
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCEECCEECCCCC
ARKDLDVPLLNEKEIPASVRYSLGGVAMDDKSKVRGMALKLENQNASWTMVMLNTEINFA
CCCCCCCCCCCCCCCCCHHHHCCCCEEECCHHHCCEEEEEEECCCCEEEEEEEECCCCCC
KNPNEFAQFFEMRIPKNGKVDEARIKKLYEEVPSYRNFAAYTKTIGISSSVANTPYYSVH
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCEEEE
AFKFKDKKEKLLPARWKFVPKDGIKYLNPQELKQKDSNYLLSSFQQHLKNKPIEYQMYLV
EEEECCCHHHCCCHHEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEE
FANKNDATNDTTALWKGKHKELLVGTLKVEKYEGMGCNKDVYFPADLPKGVEAPTDPLFQ
EECCCCCCCCCHHEECCCCCEEEEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCHHHH
IRNEVYGITFNRRQ
HHHHHEEEEEECCC
>Mature Secondary Structure
MKKIGLSLCLVVSLGFLKAHEVSAEEIADIFYKLNAKEPKMKINHTKGFCAKGVFLPNPQ
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCEECCEECCCCC
ARKDLDVPLLNEKEIPASVRYSLGGVAMDDKSKVRGMALKLENQNASWTMVMLNTEINFA
CCCCCCCCCCCCCCCCCHHHHCCCCEEECCHHHCCEEEEEEECCCCEEEEEEEECCCCCC
KNPNEFAQFFEMRIPKNGKVDEARIKKLYEEVPSYRNFAAYTKTIGISSSVANTPYYSVH
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCEEEE
AFKFKDKKEKLLPARWKFVPKDGIKYLNPQELKQKDSNYLLSSFQQHLKNKPIEYQMYLV
EEEECCCHHHCCCHHEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEE
FANKNDATNDTTALWKGKHKELLVGTLKVEKYEGMGCNKDVYFPADLPKGVEAPTDPLFQ
EECCCCCCCCCHHEECCCCCEEEEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCHHHH
IRNEVYGITFNRRQ
HHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]