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The map label for this gene is 188527257

Identifier: 188527257

GI number: 188527257

Start: 446855

End: 447415

Strand: Reverse

Name: 188527257

Synonym: HPSH_02320

Alternate gene names: NA

Gene position: 447415-446855 (Counterclockwise)

Preceding gene: 188527258

Following gene: 188527256

Centisome position: 27.81

GC content: 42.78

Gene sequence:

>561_bases
ATGATTAAAAGAATTGCTTGTATTTTAAGCTTGAGCACGAGTTTAGCGCTTGCTGGCGAAGTGAATGGCTTTTTTATGGG
TGCGGGTTATCAGCAAGGTCGTTATGGCCCTTATAACAGCAATTACTCTGATTGGCGCCATGGCAATGATCTTTATGGTT
TGAATTTCAAATTAGGTTTTGTAGGCTTTGCCAATAAATGGTTTGGGGCTAGGGTGTATGGCTTTTTAGATTGGTTTAAC
ACTTCAGGGACTGAACACACAAAAACCAATTTACTCACCTATGGTGGCGGTGGCGATTTGATTGTCAATCTCATTCCTTT
GGATAAATTCGCTCTAGGCCTTATTGGTGGCGTTCAGTTAGCCGGAAACACTTGGATGTTCCCTTATGATGTCAATCAAA
CGAGATTCCAGTTCTTATGGAATTTAGGCGGAAGAATGCGCATTGGGGATCGCAGCGCGTTTGAAGCGGGCGTGAAATTC
CCTATGGTTAATCAGGGCAGCAAAGATGTGGGGCTTATCCGCTACTATTCTTGGTATGTGGATTATGTCTTCACTTTCTA
A

Upstream 100 bases:

>100_bases
ATTTTCACTCTAAAACCCTCAATCTTTGATAAAAAATTAAATCTTTTAGAAAAATAACCGATTTTAGGGTGTAACTTTAA
TTCAACAAGAAGGATTTATT

Downstream 100 bases:

>100_bases
TCCGTTCTTTCATTTCTTCCATTCGCTCTTCTTCATCAAACTAAACCCTAGCCAACTCTTGAAAGGTTGGGGTTCAAAAA
TCTTTTTCATAAACAGAAAG

Product: outer membrane protein (omp11)

Products: NA

Alternate protein names: Outer Membrane Protein HorE; Outer Membrane Protein/Porin; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein Omp; Outer Membrane Protein HorL; Outer Membrane Protein,HopV SabB SabA; Outer Membrane Protein HopD

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MIKRIACILSLSTSLALAGEVNGFFMGAGYQQGRYGPYNSNYSDWRHGNDLYGLNFKLGFVGFANKWFGARVYGFLDWFN
TSGTEHTKTNLLTYGGGGDLIVNLIPLDKFALGLIGGVQLAGNTWMFPYDVNQTRFQFLWNLGGRMRIGDRSAFEAGVKF
PMVNQGSKDVGLIRYYSWYVDYVFTF

Sequences:

>Translated_186_residues
MIKRIACILSLSTSLALAGEVNGFFMGAGYQQGRYGPYNSNYSDWRHGNDLYGLNFKLGFVGFANKWFGARVYGFLDWFN
TSGTEHTKTNLLTYGGGGDLIVNLIPLDKFALGLIGGVQLAGNTWMFPYDVNQTRFQFLWNLGGRMRIGDRSAFEAGVKF
PMVNQGSKDVGLIRYYSWYVDYVFTF
>Mature_186_residues
MIKRIACILSLSTSLALAGEVNGFFMGAGYQQGRYGPYNSNYSDWRHGNDLYGLNFKLGFVGFANKWFGARVYGFLDWFN
TSGTEHTKTNLLTYGGGGDLIVNLIPLDKFALGLIGGVQLAGNTWMFPYDVNQTRFQFLWNLGGRMRIGDRSAFEAGVKF
PMVNQGSKDVGLIRYYSWYVDYVFTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20939; Mature: 20939

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRIACILSLSTSLALAGEVNGFFMGAGYQQGRYGPYNSNYSDWRHGNDLYGLNFKLGF
CCCCEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
VGFANKWFGARVYGFLDWFNTSGTEHTKTNLLTYGGGGDLIVNLIPLDKFALGLIGGVQL
EEECCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHCCEEE
AGNTWMFPYDVNQTRFQFLWNLGGRMRIGDRSAFEAGVKFPMVNQGSKDVGLIRYYSWYV
CCCEEEEEEECCHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCCEEHEEEHEEEE
DYVFTF
EEEEEC
>Mature Secondary Structure
MIKRIACILSLSTSLALAGEVNGFFMGAGYQQGRYGPYNSNYSDWRHGNDLYGLNFKLGF
CCCCEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
VGFANKWFGARVYGFLDWFNTSGTEHTKTNLLTYGGGGDLIVNLIPLDKFALGLIGGVQL
EEECCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHCCEEE
AGNTWMFPYDVNQTRFQFLWNLGGRMRIGDRSAFEAGVKFPMVNQGSKDVGLIRYYSWYV
CCCEEEEEEECCHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCCEEHEEEHEEEE
DYVFTF
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA