Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527049

Identifier: 188527049

GI number: 188527049

Start: 236718

End: 237002

Strand: Reverse

Name: 188527049

Synonym: HPSH_01260

Alternate gene names: NA

Gene position: 237002-236718 (Counterclockwise)

Preceding gene: 188527050

Following gene: 188527048

Centisome position: 14.73

GC content: 35.09

Gene sequence:

>285_bases
ATGAGAGATTACAGCGAGCTTGAAATTTTTGAGGGAAACCCCTTAGACAAGTGGAATGACATTATTTTTCATGCGAGTAA
AAAGCTTTCTAAAAAAGAGCTAGAAAGGCTTTTAGAGCTTTTGGCTCTCTTGGAAACTTTTATAGAAAAAGAAGACTTAG
AAGAAAAGTTTGAATCTTTCGCTAAAGCCTTAAGAATTGATGAAGAGTTGCAACAAAAAATAGAGAGCAAAAAAACAGAC
ATTGTGATCCAATCCATGGCGAATATTCTCAGCGGGAATGAATGA

Upstream 100 bases:

>100_bases
AAGTAACCGTAACTTATGCGGACGATCAATTGGCCAAGTTGCAAAAATCCATTTGGATGCTGCAAGCCCATTTGGCTTAA
GCGACCAAAAAGAAGCCAGC

Downstream 100 bases:

>100_bases
TCTTATCCGCTATGGCTTGATATTCCTCTTTTTTTTAAGGGCGTTTGGGCTTGATTATGGGATAGATAAAACGCTAGAAT
TAAAAAAAGATGAAGTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEEKFESFAKALRIDEELQQKIESKKTD
IVIQSMANILSGNE

Sequences:

>Translated_94_residues
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEEKFESFAKALRIDEELQQKIESKKTD
IVIQSMANILSGNE
>Mature_94_residues
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEEKFESFAKALRIDEELQQKIESKKTD
IVIQSMANILSGNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11059; Mature: 11059

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEEKFESF
CCCCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKALRIDEELQQKIESKKTDIVIQSMANILSGNE
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEEKFESF
CCCCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKALRIDEELQQKIESKKTDIVIQSMANILSGNE
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA