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The map label for this gene is 188527035

Identifier: 188527035

GI number: 188527035

Start: 223726

End: 225147

Strand: Reverse

Name: 188527035

Synonym: HPSH_01190

Alternate gene names: NA

Gene position: 225147-223726 (Counterclockwise)

Preceding gene: 188527036

Following gene: 188527033

Centisome position: 14.0

GC content: 41.49

Gene sequence:

>1422_bases
ATGGCGTCATCGCTCCTTGCTGAAGATGACGGCGTTTTTTTAAGCGTGGGCTATCAAATCGGCGAAGCCGCTCAAATGGT
GAAAAACACCGGCGAAATCCAAAAAGTCTCCAACGCTTACGAAAATTTGAACAATCTTTTAACCCGCTATAACGAGCTCA
AACAAACGGCCTCTAACACCGATTCAAGCACCGCTCAAGCGATTGACAATCTAAAAGAGAGCGCTAACAGATTAAAAACG
ACCCCTAATAGCGCCAATCAAGCCGTGTCTTCAGCGCTCAGCTCTGCGGTAGCCATGTGGCAAGTGATAGCCTCTAATTT
AGCCAATAACTCGCTACCCACTAATGAATACGAAAAAATCAATACGATTTCTCAATCGCTCCAAAATACCCTAGAAAAAA
AGAATGATCTCACCATTGGAAATGACTATGAACAGCTTTTAACTCAAGCTAGCACCATTATTAGCACCCTTCAAAGCCAA
TGCCCAGGAATAGACGGGGGCAATGGCAAACCATGGGGCATTAATGCAAGCGGGAACGCATGCAATATTTTTGGCAACAC
ATTCAACGCCATAAACAGCATGATAAATAGCGCTAAAGAAGCCGCTAAGCAATCTAGAAGAACCGACCCAAACCAACCAA
ACCAACCAAACGCATTTACCAACGCTGATTTTAATAAAAACCTTAATCAAGTATCAAGCGTTATTAACGATACGATCTCT
TACCTCAAAGGGGACAATTTAGCAACCATCTATAACACCATTCAAAAAACGCCCGGTTCCAAAGGGTTTCAAAGTTTGGT
GAGCCGATCTAGCTATAGTTATTCTCTCAACGAAACCCAATATTCTGAATTCCAAACGACCACCAAAGAGTTTGGCCATA
ACCCTTTTAGAAGCGTGGGATTGATTAACTCTCAGATCAATAACGGGGCGATGAATGGCGTGGGCGTGCAATTAGGCTAT
AAGCAATTCTTTGGGAAAAATAAATTTTTTGGGATCCGGTATTATGCCTTTTTTGATTACAACCATGCCTATATCAAATC
CAACTTTTTTAACTCCGCTTCTAATGTTTTCACTTATGGCGCAGGCAGTGATCTTTTATTGAATTTCATCAATGGCGGAT
CCAATCAAAACCGCAAAATCTCTTTTGGCATTTTTGGAGGCATCGCTCTAGCCGGCACAACATGGCTTAATTCGCAATTT
GTGAATTTAAAAACCACCACTAGCATCTACAACGCTAAAATCAACAACACCAATTTCCAATTCTTATTCAATACCGGTTT
AAGGCTTCAAGGGATTCACCATGGCGTTGAATTAGGCGTGAAGATCCCCACCATCAACACGAATTACTATTCTTTCATGG
GCGCTAAATTAGCATACCGAAGACTCTATAGCGTGTATTTCAATTATGTTTTGGCTTATTGA

Upstream 100 bases:

>100_bases
AACGCATTGTAAATAAAGTTTCAATTTGATACGATTTTGCAAATAAAACATTACTTTAAGGAACATTTTATGAAAAAAAC
GATTTTACTTTCTCTTATGT

Downstream 100 bases:

>100_bases
TATTGAATCGGTTCTCATTATTAATGAGGACAAAGCCAACTTTTTGGCTCTCAATGCATAAGGGCATCATTTTACTTGAC
TTTTTACAAAAAACACACTA

Product: outer membrane protein (omp6)

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopE; Outer Membrane Protein HopZ; Outer Membrane Protein HorE; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Function; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HorL; Outer Membrane Protein HorB; Outer Membrane Protein HopG; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein HorC; Outer Membrane Protein,HopV SabB SabA; Outer Membrane Protein HopD; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopF

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MASSLLAEDDGVFLSVGYQIGEAAQMVKNTGEIQKVSNAYENLNNLLTRYNELKQTASNTDSSTAQAIDNLKESANRLKT
TPNSANQAVSSALSSAVAMWQVIASNLANNSLPTNEYEKINTISQSLQNTLEKKNDLTIGNDYEQLLTQASTIISTLQSQ
CPGIDGGNGKPWGINASGNACNIFGNTFNAINSMINSAKEAAKQSRRTDPNQPNQPNAFTNADFNKNLNQVSSVINDTIS
YLKGDNLATIYNTIQKTPGSKGFQSLVSRSSYSYSLNETQYSEFQTTTKEFGHNPFRSVGLINSQINNGAMNGVGVQLGY
KQFFGKNKFFGIRYYAFFDYNHAYIKSNFFNSASNVFTYGAGSDLLLNFINGGSNQNRKISFGIFGGIALAGTTWLNSQF
VNLKTTTSIYNAKINNTNFQFLFNTGLRLQGIHHGVELGVKIPTINTNYYSFMGAKLAYRRLYSVYFNYVLAY

Sequences:

>Translated_473_residues
MASSLLAEDDGVFLSVGYQIGEAAQMVKNTGEIQKVSNAYENLNNLLTRYNELKQTASNTDSSTAQAIDNLKESANRLKT
TPNSANQAVSSALSSAVAMWQVIASNLANNSLPTNEYEKINTISQSLQNTLEKKNDLTIGNDYEQLLTQASTIISTLQSQ
CPGIDGGNGKPWGINASGNACNIFGNTFNAINSMINSAKEAAKQSRRTDPNQPNQPNAFTNADFNKNLNQVSSVINDTIS
YLKGDNLATIYNTIQKTPGSKGFQSLVSRSSYSYSLNETQYSEFQTTTKEFGHNPFRSVGLINSQINNGAMNGVGVQLGY
KQFFGKNKFFGIRYYAFFDYNHAYIKSNFFNSASNVFTYGAGSDLLLNFINGGSNQNRKISFGIFGGIALAGTTWLNSQF
VNLKTTTSIYNAKINNTNFQFLFNTGLRLQGIHHGVELGVKIPTINTNYYSFMGAKLAYRRLYSVYFNYVLAY
>Mature_472_residues
ASSLLAEDDGVFLSVGYQIGEAAQMVKNTGEIQKVSNAYENLNNLLTRYNELKQTASNTDSSTAQAIDNLKESANRLKTT
PNSANQAVSSALSSAVAMWQVIASNLANNSLPTNEYEKINTISQSLQNTLEKKNDLTIGNDYEQLLTQASTIISTLQSQC
PGIDGGNGKPWGINASGNACNIFGNTFNAINSMINSAKEAAKQSRRTDPNQPNQPNAFTNADFNKNLNQVSSVINDTISY
LKGDNLATIYNTIQKTPGSKGFQSLVSRSSYSYSLNETQYSEFQTTTKEFGHNPFRSVGLINSQINNGAMNGVGVQLGYK
QFFGKNKFFGIRYYAFFDYNHAYIKSNFFNSASNVFTYGAGSDLLLNFINGGSNQNRKISFGIFGGIALAGTTWLNSQFV
NLKTTTSIYNAKINNTNFQFLFNTGLRLQGIHHGVELGVKIPTINTNYYSFMGAKLAYRRLYSVYFNYVLAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52004; Mature: 51873

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSLLAEDDGVFLSVGYQIGEAAQMVKNTGEIQKVSNAYENLNNLLTRYNELKQTASNT
CCCCCCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSSTAQAIDNLKESANRLKTTPNSANQAVSSALSSAVAMWQVIASNLANNSLPTNEYEKI
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
NTISQSLQNTLEKKNDLTIGNDYEQLLTQASTIISTLQSQCPGIDGGNGKPWGINASGNA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCE
CNIFGNTFNAINSMINSAKEAAKQSRRTDPNQPNQPNAFTNADFNKNLNQVSSVINDTIS
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YLKGDNLATIYNTIQKTPGSKGFQSLVSRSSYSYSLNETQYSEFQTTTKEFGHNPFRSVG
HHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHH
LINSQINNGAMNGVGVQLGYKQFFGKNKFFGIRYYAFFDYNHAYIKSNFFNSASNVFTYG
HHHHCCCCCCCCCCEEEECHHHHCCCCCEEEEEEEEEEECCCCEEEHHHHCCCCCEEEEC
AGSDLLLNFINGGSNQNRKISFGIFGGIALAGTTWLNSQFVNLKTTTSIYNAKINNTNFQ
CCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEEEEEEEEECCCCEE
FLFNTGLRLQGIHHGVELGVKIPTINTNYYSFMGAKLAYRRLYSVYFNYVLAY
EEEECCCEEEEECCCEEECEEECEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASSLLAEDDGVFLSVGYQIGEAAQMVKNTGEIQKVSNAYENLNNLLTRYNELKQTASNT
CCCCCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSSTAQAIDNLKESANRLKTTPNSANQAVSSALSSAVAMWQVIASNLANNSLPTNEYEKI
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
NTISQSLQNTLEKKNDLTIGNDYEQLLTQASTIISTLQSQCPGIDGGNGKPWGINASGNA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCE
CNIFGNTFNAINSMINSAKEAAKQSRRTDPNQPNQPNAFTNADFNKNLNQVSSVINDTIS
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YLKGDNLATIYNTIQKTPGSKGFQSLVSRSSYSYSLNETQYSEFQTTTKEFGHNPFRSVG
HHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHH
LINSQINNGAMNGVGVQLGYKQFFGKNKFFGIRYYAFFDYNHAYIKSNFFNSASNVFTYG
HHHHCCCCCCCCCCEEEECHHHHCCCCCEEEEEEEEEEECCCCEEEHHHHCCCCCEEEEC
AGSDLLLNFINGGSNQNRKISFGIFGGIALAGTTWLNSQFVNLKTTTSIYNAKINNTNFQ
CCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEEEEEEEEECCCCEE
FLFNTGLRLQGIHHGVELGVKIPTINTNYYSFMGAKLAYRRLYSVYFNYVLAY
EEEECCCEEEEECCCEEECEEECEECCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA