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The map label for this gene is rpmF

Identifier: 188527005

GI number: 188527005

Start: 190528

End: 190674

Strand: Direct

Name: rpmF

Synonym: HPSH_01025

Alternate gene names: 188527005

Gene position: 190528-190674 (Clockwise)

Preceding gene: 188527004

Following gene: 188527006

Centisome position: 11.84

GC content: 42.18

Gene sequence:

>147_bases
ATGGCAGTACCTGATAGAAGAGTGAGTAAGACGAGAGCGGCAAAAAGGCGCACGCATTATAGCGTTAAGTTGGCTAAGCC
CATAAAAGCTAAAGATGGCACTTGGAAGCTTCCCCACCACATTAACAAATTTACTAAAGAATACTAA

Upstream 100 bases:

>100_bases
ATCTTTCAATGGTTTTATTGATTTGAGCGAAATTTTACGCTCTGAAGTGGAGTCTATTAGATTAGACTACCATTATGCAG
ATTGAAATTAAGGAGAATTT

Downstream 100 bases:

>100_bases
TATAAAAGCTATCTTTAATGATAGAAAGTATTTTAAAGGATTGCAACAAGCCTTTTAAGGACGCATGATGAAAATTGTAA
TAGACTTAATGGGGGCTGAC

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 47

Protein sequence:

>48_residues
MAVPDRRVSKTRAAKRRTHYSVKLAKPIKAKDGTWKLPHHINKFTKEY

Sequences:

>Translated_48_residues
MAVPDRRVSKTRAAKRRTHYSVKLAKPIKAKDGTWKLPHHINKFTKEY
>Mature_47_residues
AVPDRRVSKTRAAKRRTHYSVKLAKPIKAKDGTWKLPHHINKFTKEY

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_HELAH (Q17YQ4)

Other databases:

- EMBL:   AM260522
- RefSeq:   YP_664221.1
- ProteinModelPortal:   Q17YQ4
- SMR:   Q17YQ4
- STRING:   Q17YQ4
- GeneID:   4176860
- GenomeReviews:   AM260522_GR
- KEGG:   hac:Hac_0385
- eggNOG:   COG0333
- HOGENOM:   HBG728381
- ProtClustDB:   PRK01110
- BioCyc:   HACI382638:HAC_0385-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 5661; Mature: 5530

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPDRRVSKTRAAKRRTHYSVKLAKPIKAKDGTWKLPHHINKFTKEY
CCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCEECCHHHHHHHCCC
>Mature Secondary Structure 
AVPDRRVSKTRAAKRRTHYSVKLAKPIKAKDGTWKLPHHINKFTKEY
CCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCEECCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA