Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

Click here to switch to the map view.

The map label for this gene is 188526992

Identifier: 188526992

GI number: 188526992

Start: 177878

End: 178063

Strand: Reverse

Name: 188526992

Synonym: HPSH_00945

Alternate gene names: NA

Gene position: 178063-177878 (Counterclockwise)

Preceding gene: 188526993

Following gene: 188526985

Centisome position: 11.07

GC content: 40.86

Gene sequence:

>186_bases
GTGAGATTAAAGAAGCGTGAGCACGCTTGCTCTCTTGCTTCTAGCCCCACCATCGCACCCATAAGGCTAGTTTCAAACCG
CTCTCTTCTTGGAGAGTTAGAGGGTTATCAAACAACAAACAATAATTTCATAAGATTTAAACGCCCCATAGTTTTCAAAC
AACAAACAAATGTCTTTAGCGAATGA

Upstream 100 bases:

>100_bases
ATGTAAAAGGTTTCAACAAAAAGGCCTTGATAGCAAGGAATGATGAAATGCGAGAGTGGCTGATCAACACCTTTTTTAAG
GATTTCGCCGCCCACTAAGC

Downstream 100 bases:

>100_bases
ATGCTCTTTAAGACTGAATTCAAACGCAAGAATTGTCTGAATTCCTCAAAGACCAAATAGGAATATTGATCAAAAAGCCC
GCTTATCTTGACTCTCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MRLKKREHACSLASSPTIAPIRLVSNRSLLGELEGYQTTNNNFIRFKRPIVFKQQTNVFSE

Sequences:

>Translated_61_residues
MRLKKREHACSLASSPTIAPIRLVSNRSLLGELEGYQTTNNNFIRFKRPIVFKQQTNVFSE
>Mature_61_residues
MRLKKREHACSLASSPTIAPIRLVSNRSLLGELEGYQTTNNNFIRFKRPIVFKQQTNVFSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7037; Mature: 7037

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKKREHACSLASSPTIAPIRLVSNRSLLGELEGYQTTNNNFIRFKRPIVFKQQTNVFS
CCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEEECCCCEEEEECCEEEECCCCCCC
E
C
>Mature Secondary Structure
MRLKKREHACSLASSPTIAPIRLVSNRSLLGELEGYQTTNNNFIRFKRPIVFKQQTNVFS
CCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEEECCCCEEEEECCEEEECCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA