| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188526992
Identifier: 188526992
GI number: 188526992
Start: 177878
End: 178063
Strand: Reverse
Name: 188526992
Synonym: HPSH_00945
Alternate gene names: NA
Gene position: 178063-177878 (Counterclockwise)
Preceding gene: 188526993
Following gene: 188526985
Centisome position: 11.07
GC content: 40.86
Gene sequence:
>186_bases GTGAGATTAAAGAAGCGTGAGCACGCTTGCTCTCTTGCTTCTAGCCCCACCATCGCACCCATAAGGCTAGTTTCAAACCG CTCTCTTCTTGGAGAGTTAGAGGGTTATCAAACAACAAACAATAATTTCATAAGATTTAAACGCCCCATAGTTTTCAAAC AACAAACAAATGTCTTTAGCGAATGA
Upstream 100 bases:
>100_bases ATGTAAAAGGTTTCAACAAAAAGGCCTTGATAGCAAGGAATGATGAAATGCGAGAGTGGCTGATCAACACCTTTTTTAAG GATTTCGCCGCCCACTAAGC
Downstream 100 bases:
>100_bases ATGCTCTTTAAGACTGAATTCAAACGCAAGAATTGTCTGAATTCCTCAAAGACCAAATAGGAATATTGATCAAAAAGCCC GCTTATCTTGACTCTCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MRLKKREHACSLASSPTIAPIRLVSNRSLLGELEGYQTTNNNFIRFKRPIVFKQQTNVFSE
Sequences:
>Translated_61_residues MRLKKREHACSLASSPTIAPIRLVSNRSLLGELEGYQTTNNNFIRFKRPIVFKQQTNVFSE >Mature_61_residues MRLKKREHACSLASSPTIAPIRLVSNRSLLGELEGYQTTNNNFIRFKRPIVFKQQTNVFSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7037; Mature: 7037
Theoretical pI: Translated: 11.18; Mature: 11.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKKREHACSLASSPTIAPIRLVSNRSLLGELEGYQTTNNNFIRFKRPIVFKQQTNVFS CCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEEECCCCEEEEECCEEEECCCCCCC E C >Mature Secondary Structure MRLKKREHACSLASSPTIAPIRLVSNRSLLGELEGYQTTNNNFIRFKRPIVFKQQTNVFS CCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEEECCCCEEEEECCEEEECCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA