| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188526953
Identifier: 188526953
GI number: 188526953
Start: 144830
End: 144937
Strand: Direct
Name: 188526953
Synonym: HPSH_00750
Alternate gene names: NA
Gene position: 144830-144937 (Clockwise)
Preceding gene: 188526952
Following gene: 188526954
Centisome position: 9.0
GC content: 30.56
Gene sequence:
>108_bases ATGAAATTCACGACTTTAGAAAAAATCTTAGCTTTAATGGTAGTAGCGACCATTTTAATGACGATTGTTATTTCTTTTGT GCCTAACTTGTTTTTGTTTAGCACATGA
Upstream 100 bases:
>100_bases AAGCCACCAATTATTACCGCTATAAGGATATTAACGCTTTAGAGACAAAAAACACCCAAAACCGGGCTAATTATGAATTG GTCAATCAAGGGAGTAAAAA
Downstream 100 bases:
>100_bases GAATCTTATGGCTTGCAATAGCCTTTGTTTGTTGTTTGGGGGCTGATGATTATGTTTTTAATAATTCTAAGGGGCGTTTG GTAGAAAAAAGCGTTGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 35; Mature: 35
Protein sequence:
>35_residues MKFTTLEKILALMVVATILMTIVISFVPNLFLFST
Sequences:
>Translated_35_residues MKFTTLEKILALMVVATILMTIVISFVPNLFLFST >Mature_35_residues MKFTTLEKILALMVVATILMTIVISFVPNLFLFST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3947; Mature: 3947
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.6 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTTLEKILALMVVATILMTIVISFVPNLFLFST CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKFTTLEKILALMVVATILMTIVISFVPNLFLFST CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA