Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188526937

Identifier: 188526937

GI number: 188526937

Start: 129919

End: 130011

Strand: Direct

Name: 188526937

Synonym: HPSH_00670

Alternate gene names: NA

Gene position: 129919-130011 (Clockwise)

Preceding gene: 188526934

Following gene: 188526938

Centisome position: 8.08

GC content: 39.78

Gene sequence:

>93_bases
TTGGGGTTTTTTGAGATTAGGGGGGTGGTTTTTAGCGCGCATTTATTTCCTAAAATCCACGATTTAACCCGCACAAGCTA
TAATAACGCTTAA

Upstream 100 bases:

>100_bases
TTTTTAGGATCTCTTATAAGCGCTTTTCCTTGTGCCATGCTATTAAACCGCCTTTTTATCGTGTTAAAGAGTTCTCATTG
TAGCATAAAGCTTTTTATGA

Downstream 100 bases:

>100_bases
AAAAAGATTAATAAAGGATTGTAGAAATGTCAAACACAACTTGGTCGCCCGCTTCATGGCATTCTTTTAAGATAGAGCAA
CACCCCACTTATAAAGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 30; Mature: 29

Protein sequence:

>30_residues
MGFFEIRGVVFSAHLFPKIHDLTRTSYNNA

Sequences:

>Translated_30_residues
MGFFEIRGVVFSAHLFPKIHDLTRTSYNNA
>Mature_29_residues
GFFEIRGVVFSAHLFPKIHDLTRTSYNNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3469; Mature: 3338

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFEIRGVVFSAHLFPKIHDLTRTSYNNA
CCCCHHHHHHHHHHCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
GFFEIRGVVFSAHLFPKIHDLTRTSYNNA
CCCHHHHHHHHHHCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA