Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188526917

Identifier: 188526917

GI number: 188526917

Start: 107500

End: 107796

Strand: Direct

Name: 188526917

Synonym: HPSH_00570

Alternate gene names: NA

Gene position: 107500-107796 (Clockwise)

Preceding gene: 188526916

Following gene: 188526920

Centisome position: 6.68

GC content: 37.04

Gene sequence:

>297_bases
ATGACCATTAACACCCATTACACCCCTAATTTCACACAGTTCCAAACCCTAAACAATATCAATAATGACGCAACCATAAA
AGATAGGAATCAAGTAGAGCAGGATTTACAACAAAGCAATATTCAAGATGGTTTCAGCCAAGATAATACGCAAAACGCCC
CTGATTTTGACGGGTTACAAACTTTAAACGCTATCAATAACGACGGCGAGATTAAAGATAAATCCCAAGTTGAAAAAAAC
CTTGTTGATGGCGAAAATATCCCTGAAATTTATTCCAGCCTAGACACATACGCTTAA

Upstream 100 bases:

>100_bases
TGAAAACTCATGCAAGGTTTTACGACTAGGCGATTTAATGGATTATTGCTATAATGATGATCCACGATTGAGCGTGTAAA
AAGCTAAAAAAGGATAAAAC

Downstream 100 bases:

>100_bases
AGACACTACGCTTAAAAAGGGGTTTTACCATTCTTTTAAAGCCATTTTGATCGCTTCTATCACGCAATCAATCCCACCCG
CCAAACTAAAAAGCCAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MTINTHYTPNFTQFQTLNNINNDATIKDRNQVEQDLQQSNIQDGFSQDNTQNAPDFDGLQTLNAINNDGEIKDKSQVEKN
LVDGENIPEIYSSLDTYA

Sequences:

>Translated_98_residues
MTINTHYTPNFTQFQTLNNINNDATIKDRNQVEQDLQQSNIQDGFSQDNTQNAPDFDGLQTLNAINNDGEIKDKSQVEKN
LVDGENIPEIYSSLDTYA
>Mature_97_residues
TINTHYTPNFTQFQTLNNINNDATIKDRNQVEQDLQQSNIQDGFSQDNTQNAPDFDGLQTLNAINNDGEIKDKSQVEKNL
VDGENIPEIYSSLDTYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11097; Mature: 10966

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINTHYTPNFTQFQTLNNINNDATIKDRNQVEQDLQQSNIQDGFSQDNTQNAPDFDGLQ
CCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
TLNAINNDGEIKDKSQVEKNLVDGENIPEIYSSLDTYA
HHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TINTHYTPNFTQFQTLNNINNDATIKDRNQVEQDLQQSNIQDGFSQDNTQNAPDFDGLQ
CCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
TLNAINNDGEIKDKSQVEKNLVDGENIPEIYSSLDTYA
HHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA