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The map label for this gene is 188526849

Identifier: 188526849

GI number: 188526849

Start: 35622

End: 36365

Strand: Direct

Name: 188526849

Synonym: HPSH_00195

Alternate gene names: NA

Gene position: 35622-36365 (Clockwise)

Preceding gene: 188526848

Following gene: 188526850

Centisome position: 2.21

GC content: 40.73

Gene sequence:

>744_bases
ATGAAAGAAAAGCCTTTCAATAGCGAGCAGTTGGCTTTTTTAGAAGAGCTTTTAAGCCACCAAGAAAAACATTTAGAAAA
CAAGCTTTCTGGTTTTTCGGTGAGTGATTTGGACATGCAAAGCGTGTTCAGATTAGAGAGGAACCGCTTGAAAATCGCTT
ATAAACTCTTAGGTTTGATGAGTTTTATCGCTCTTGTTTTAGCGATCGTGTTAATCAGTGTTTTACCCCTACAAAAAACC
GAACACCATTTCGTGGATTTTTTAAACCAGGACAAGCATTACGCCATTATCCAAAGAGCGGATAAAAGCATTTCCAGTAA
TGAAGCGTTGGCTCGTTCGCTCATTGGGGCGTATGTGTTAAACCGGGAGAGCATTAATCGCATTGACGATAAATCGCGCT
ATGAATTGGTGCGTTTGCAAAGCAGTTCTAAAGTGTGGCAACGCTTTGAAGATTTGATTAAAACCCAAAACAGCATTTAT
GCGCAAAGCCATTTGGAAAGAGAAGTCCATATCGTCAATATTGCGATCTTTCAGCAAGACAATAACCCCATTGCGAGCGT
CTCTATTGCAGCTAAACTCATGAATGAAAACAAGCTAGTTTATGAAAAGCGTTATAAAATCGCGCTGAGTTATTTGTTTG
ACACCCCGGATTTTGATTACGCTTCCATGCCCAAAAACCCTACCGGCTTTAAAATCACTCGCTACAGCATCACTGAAATC
GTGCCGACTAATAGGGGCGATTGA

Upstream 100 bases:

>100_bases
TTTCTGTCATTATGGGAATCATGTTGTTTGGTTGCACCAGTAAGGTGCATGAGATGAAAAAAAGCCCTTGCACATTGTAT
GAAAACAGGTTGAATCTTGC

Downstream 100 bases:

>100_bases
TGCGTAAGGTTTTATACGCTCTTGTGGGCTTTTTGTTGGCTTTTAGCGCTTTAAGAGCCGATGATTTTTTAGAAGAAGCT
AACGAAACAGCCCCGGCGAA

Product: comB8 competence protein

Products: NA

Alternate protein names: ComB8 Competence Protein; ComB1 Protein

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKEKPFNSEQLAFLEELLSHQEKHLENKLSGFSVSDLDMQSVFRLERNRLKIAYKLLGLMSFIALVLAIVLISVLPLQKT
EHHFVDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVLNRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKTQNSIY
AQSHLEREVHIVNIAIFQQDNNPIASVSIAAKLMNENKLVYEKRYKIALSYLFDTPDFDYASMPKNPTGFKITRYSITEI
VPTNRGD

Sequences:

>Translated_247_residues
MKEKPFNSEQLAFLEELLSHQEKHLENKLSGFSVSDLDMQSVFRLERNRLKIAYKLLGLMSFIALVLAIVLISVLPLQKT
EHHFVDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVLNRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKTQNSIY
AQSHLEREVHIVNIAIFQQDNNPIASVSIAAKLMNENKLVYEKRYKIALSYLFDTPDFDYASMPKNPTGFKITRYSITEI
VPTNRGD
>Mature_247_residues
MKEKPFNSEQLAFLEELLSHQEKHLENKLSGFSVSDLDMQSVFRLERNRLKIAYKLLGLMSFIALVLAIVLISVLPLQKT
EHHFVDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVLNRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKTQNSIY
AQSHLEREVHIVNIAIFQQDNNPIASVSIAAKLMNENKLVYEKRYKIALSYLFDTPDFDYASMPKNPTGFKITRYSITEI
VPTNRGD

Specific function: Unknown

COG id: COG3736

COG function: function code U; Type IV secretory pathway, component VirB8

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28598; Mature: 28598

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKPFNSEQLAFLEELLSHQEKHLENKLSGFSVSDLDMQSVFRLERNRLKIAYKLLGLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SFIALVLAIVLISVLPLQKTEHHFVDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH
NRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKTQNSIYAQSHLEREVHIVNIAIFQQD
CHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECC
NNPIASVSIAAKLMNENKLVYEKRYKIALSYLFDTPDFDYASMPKNPTGFKITRYSITEI
CCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEHCCCCCCCCCCCCCCCCCEEEEEEEEEEE
VPTNRGD
CCCCCCC
>Mature Secondary Structure
MKEKPFNSEQLAFLEELLSHQEKHLENKLSGFSVSDLDMQSVFRLERNRLKIAYKLLGLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SFIALVLAIVLISVLPLQKTEHHFVDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH
NRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKTQNSIYAQSHLEREVHIVNIAIFQQD
CHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECC
NNPIASVSIAAKLMNENKLVYEKRYKIALSYLFDTPDFDYASMPKNPTGFKITRYSITEI
CCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEHCCCCCCCCCCCCCCCCCEEEEEEEEEEE
VPTNRGD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA