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The map label for this gene is 188526831

Identifier: 188526831

GI number: 188526831

Start: 19083

End: 20300

Strand: Direct

Name: 188526831

Synonym: HPSH_00105

Alternate gene names: NA

Gene position: 19083-20300 (Clockwise)

Preceding gene: 188526830

Following gene: 188526835

Centisome position: 1.19

GC content: 42.61

Gene sequence:

>1218_bases
ATGAAAAAATACAGTGCTATCCCCACCCCTTGCTATGTGTTAGAGAGCGAACGCTTAGAAAAAAACGCCAAAATTTTAGA
AATCGTGCACCAACAAAGCGGGGCAAAGGTCTTGCTCGCTTTAAAGGGGTATGCGTTTTGGCGTGAGTTTGGGATTTTGA
GGCAAAAATTGAACGGGTGTTGCGCGAGCGGTCTTTATGAGGCTAAGCTCGCTTTTGAAGAATTTGGAGGGCGAGAGAGC
CAGAAGGAAATTTGCGTTTATAGCCCAGCTTTCAAAGAGGCTGAAATGAGCGCGATCTTACCCCTAGCGACAAGCGTTAT
TTTTAACTCTTTTTACCAATACGCTACCTATAAAGATAGGATTTTAGATAAAAACAAGCAATTAGAAAACTTGGGCTTAA
GCCCCATTAAAATGGGTTTGAGGATCAACCCTCTCTATAGTGAAGTAACCCCAGTAATCTATAACCCATGCTCTAAAGTG
AGCCGGTTAGGGATTACGCCTAGCGAGTTTGAAAAGGGGGTTAAAGAGCATGGGTTAGAGGGGGTGAGCGGGTTGCATTT
CCATACGCATTGCGAGCAAAACGCTGACGCTTTGTGCCGGACTTTAGAGCATGTAGAAAGGCATTTCAAGCCCTATTTAG
AAAATATGGCGTGGGTGAATTTTGGTGGGGGGCATCACATCACTAGGAGCGATTATGATGTGAATTTGCTCATCCAAACG
ATTAAGGATTTTAAAGAGCGTTATCGTAATATAGAGGTGGTTTTAGAGCCTGGGGAAGCCATAGGGTGGCAATGCGGGTT
TTTGATCGCAAGCGTGATAGACATCGTTAAAAACGATCAAGAAATTGCGATTTTAGACGCTTCTTTTAGCGCTCACATGC
CCGATTGCTTGGAAATGCCTTATCGCCCTAGCATCCTTAAAATTTCCGTAGAAAATGATGAAGAGCTTGTTGAAGTTGAA
AAGGGCGAAAATCAAGGGGCGTTTTCTTATTTTTTAGGCGGCCCTACTTGTTTAGCGGGGGATTTTATGGGGAGTTTTAG
CTTTGAGACGCCTTTAAAAAGGGGCGATAAAATCGTGTTTCAAGACATGCTCCATTATACGATTGTCAAAAACAACTCGT
TTAATGGCGTGCCACTCCCAAGCCTGGCTAGATTGGATCAACAAGGGTTTAAAATCCTTAAAAACTTTTCTTATGAAGAT
TATAAAAACAGAAATTAA

Upstream 100 bases:

>100_bases
CTAATGAAGACATGGCCAGGAGTTTAAAGGCCGATGATTTCATCTCCAAGTCTAACCCCAAAGACATACAGCGAGTGGTT
AAGCAATTTTTGGAATCAGC

Downstream 100 bases:

>100_bases
GGCTTTTGATTAGGGCTTTTTGGGGCTTGTAAAAAGGCTCACGCACAACATTCCAATGCCAAGCCCGGCCAACACCGCAC
CAGTGGTGTGCGCGTCTAAA

Product: carboxynorspermidine decarboxylase (nspC)

Products: NA

Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MKKYSAIPTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRES
QKEICVYSPAFKEAEMSAILPLATSVIFNSFYQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKV
SRLGITPSEFEKGVKEHGLEGVSGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT
IKDFKERYRNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSILKISVENDEELVEVE
KGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFKILKNFSYED
YKNRN

Sequences:

>Translated_405_residues
MKKYSAIPTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRES
QKEICVYSPAFKEAEMSAILPLATSVIFNSFYQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKV
SRLGITPSEFEKGVKEHGLEGVSGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT
IKDFKERYRNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSILKISVENDEELVEVE
KGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFKILKNFSYED
YKNRN
>Mature_405_residues
MKKYSAIPTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRES
QKEICVYSPAFKEAEMSAILPLATSVIFNSFYQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKV
SRLGITPSEFEKGVKEHGLEGVSGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT
IKDFKERYRNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSILKISVENDEELVEVE
KGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFKILKNFSYED
YKNRN

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45919; Mature: 45919

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYSAIPTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQKLNGC
CCCCCCCCCCEEEECHHHHHCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
CASGLYEAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSVIFNSFYQYATYKDR
HHCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILDKNKQLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSEFEKGVKEHGLE
HHCCCCHHHHCCCCCEEECCEECCHHHHCCHHHCCCHHHHHHCCCCHHHHHHHHHHCCCC
GVSGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH
IKDFKERYRNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMP
HHHHHHHCCCEEEEEECCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCC
YRPSILKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVF
CCCCEEEEEECCCCHHHEECCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHCCCCHHH
QDMLHYTIVKNNSFNGVPLPSLARLDQQGFKILKNFSYEDYKNRN
HHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKYSAIPTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQKLNGC
CCCCCCCCCCEEEECHHHHHCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
CASGLYEAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSVIFNSFYQYATYKDR
HHCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILDKNKQLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSEFEKGVKEHGLE
HHCCCCHHHHCCCCCEEECCEECCHHHHCCHHHCCCHHHHHHCCCCHHHHHHHHHHCCCC
GVSGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH
IKDFKERYRNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMP
HHHHHHHCCCEEEEEECCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCC
YRPSILKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVF
CCCCEEEEEECCCCHHHEECCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHCCCCHHH
QDMLHYTIVKNNSFNGVPLPSLARLDQQGFKILKNFSYEDYKNRN
HHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA