| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is groES
Identifier: 188526821
GI number: 188526821
Start: 9021
End: 9377
Strand: Reverse
Name: groES
Synonym: HPSH_00055
Alternate gene names: 188526821
Gene position: 9377-9021 (Counterclockwise)
Preceding gene: 188526832
Following gene: 188526820
Centisome position: 0.58
GC content: 41.18
Gene sequence:
>357_bases ATGAAGTTTCAGCCATTAGGAGAAAGGGTCTTAGTAGAAAGACTTGAAGAAGAGAACAAAACCAGTTCAGGCATCATCAT CCCTGATAACGCTAAAGAAAAGCCTTTAATGGGCGTAGTCAAAGTGGTTAGCCATAAAATCAGCGAGGGTTGCAAATGCG TTAAAGAAGGCGATGTGATCGCTTTTGGCAAATACAAAGGCGCAGAAATCGTTTTAGACGGCGTTGAATACATGGTGCTA GAACTAGAAGACATTCTAGGCATTGTGAGCTCAGGCTCTTGTTGTCATACAAATAGTCATGACCATAAACATGCCAAAGA GCATGAAGCTTGCTGTCATGATCACAAAAAACACTAA
Upstream 100 bases:
>100_bases TATGGCTTGACTTGTCCCTAAAAATGCGCTATAGTTATGTCGCTTAAGAATACTAAGCGCTAATTTTCTATTTTATTTAT CAAAACTTAGGAGAACCAAT
Downstream 100 bases:
>100_bases AAACATTATTATTAAGGATACAAAATGGCAAAAGAAATCAAATTTTCAGATAGCGCAAGAAACCTTTTGTTTGAAGGCGT GAGACAACTCCATGACGCTG
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein; Protein Cpn10 [H]
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKVVSHKISEGCKCVKEGDVIAFGKYKGAEIVLDGVEYMVL ELEDILGIVSSGSCCHTNSHDHKHAKEHEACCHDHKKH
Sequences:
>Translated_118_residues MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKVVSHKISEGCKCVKEGDVIAFGKYKGAEIVLDGVEYMVL ELEDILGIVSSGSCCHTNSHDHKHAKEHEACCHDHKKH >Mature_118_residues MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKVVSHKISEGCKCVKEGDVIAFGKYKGAEIVLDGVEYMVL ELEDILGIVSSGSCCHTNSHDHKHAKEHEACCHDHKKH
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 [H]
Pfam domain/function: PF00166 Cpn10 [H]
EC number: NA
Molecular weight: Translated: 13077; Mature: 13077
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKVVSHKISEGCKCVKEGDVI CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE AFGKYKGAEIVLDGVEYMVLELEDILGIVSSGSCCHTNSHDHKHAKEHEACCHDHKKH EECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKVVSHKISEGCKCVKEGDVI CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE AFGKYKGAEIVLDGVEYMVLELEDILGIVSSGSCCHTNSHDHKHAKEHEACCHDHKKH EECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA