Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is groES

Identifier: 188526821

GI number: 188526821

Start: 9021

End: 9377

Strand: Reverse

Name: groES

Synonym: HPSH_00055

Alternate gene names: 188526821

Gene position: 9377-9021 (Counterclockwise)

Preceding gene: 188526832

Following gene: 188526820

Centisome position: 0.58

GC content: 41.18

Gene sequence:

>357_bases
ATGAAGTTTCAGCCATTAGGAGAAAGGGTCTTAGTAGAAAGACTTGAAGAAGAGAACAAAACCAGTTCAGGCATCATCAT
CCCTGATAACGCTAAAGAAAAGCCTTTAATGGGCGTAGTCAAAGTGGTTAGCCATAAAATCAGCGAGGGTTGCAAATGCG
TTAAAGAAGGCGATGTGATCGCTTTTGGCAAATACAAAGGCGCAGAAATCGTTTTAGACGGCGTTGAATACATGGTGCTA
GAACTAGAAGACATTCTAGGCATTGTGAGCTCAGGCTCTTGTTGTCATACAAATAGTCATGACCATAAACATGCCAAAGA
GCATGAAGCTTGCTGTCATGATCACAAAAAACACTAA

Upstream 100 bases:

>100_bases
TATGGCTTGACTTGTCCCTAAAAATGCGCTATAGTTATGTCGCTTAAGAATACTAAGCGCTAATTTTCTATTTTATTTAT
CAAAACTTAGGAGAACCAAT

Downstream 100 bases:

>100_bases
AAACATTATTATTAAGGATACAAAATGGCAAAAGAAATCAAATTTTCAGATAGCGCAAGAAACCTTTTGTTTGAAGGCGT
GAGACAACTCCATGACGCTG

Product: co-chaperonin GroES

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKVVSHKISEGCKCVKEGDVIAFGKYKGAEIVLDGVEYMVL
ELEDILGIVSSGSCCHTNSHDHKHAKEHEACCHDHKKH

Sequences:

>Translated_118_residues
MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKVVSHKISEGCKCVKEGDVIAFGKYKGAEIVLDGVEYMVL
ELEDILGIVSSGSCCHTNSHDHKHAKEHEACCHDHKKH
>Mature_118_residues
MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKVVSHKISEGCKCVKEGDVIAFGKYKGAEIVLDGVEYMVL
ELEDILGIVSSGSCCHTNSHDHKHAKEHEACCHDHKKH

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 13077; Mature: 13077

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKVVSHKISEGCKCVKEGDVI
CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
AFGKYKGAEIVLDGVEYMVLELEDILGIVSSGSCCHTNSHDHKHAKEHEACCHDHKKH
EECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKVVSHKISEGCKCVKEGDVI
CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
AFGKYKGAEIVLDGVEYMVLELEDILGIVSSGSCCHTNSHDHKHAKEHEACCHDHKKH
EECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA