| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is manA [H]
Identifier: 187935609
GI number: 187935609
Start: 3234700
End: 3235677
Strand: Reverse
Name: manA [H]
Synonym: CLL_A3124
Alternate gene names: 187935609
Gene position: 3235677-3234700 (Counterclockwise)
Preceding gene: 187933288
Following gene: 187932797
Centisome position: 85.14
GC content: 26.99
Gene sequence:
>978_bases ATGTATCCAATTAAATTTAAAAATTTATACTATGATAGAATATGGGGCGGAAATGCTCTAAAAAAATTTAGAAGCAATAT TCCAAATGGAGTGATAGGGGAAAGCTGGGATGTTGCATGTCATCCAAATGGAGTAGGCGAAGTAGAGAATGGAAGCTTAA AAGGTAAAAAATTTGATGAAATAATTAATGAGTTTAAAGAAAAACTTATTGGCGAAAAAATAGATATAAAAAAATTTCCT TTATTAATTAAATTAATTACATCTGGAGATAAACTATCAGTTCAAGTTCATCCAAATGATGAATATGCAAATAGAGTAGA AAATGAGTTTGGTAAAACTGAAGCATGGTATGTTATTGATGCTGAAGAAAATGCAAGTTTAATAGTCGGTACAAAGGATT GCGATAAAGAAATATTTAAAAAAGCTATTAAAGACGGAAATTTAGATAAATATTTAAATAAAATGCCTGTGAAAAAAGGT GACTTTTTCTATGTACAAAGTGGATTAGTTCATGCTATATGTGAAGGTGTTTTAATAGCAGAAATTCAACAAAGCAGCGA TATTACATATAGAGTTTATGACTATAATAGAGGCAGAGAAATACATGTAGAGAAAGCTTTAGATGTTATTGATTTTTCTT TAGAAGGAAAGAACTCAAAAGGAATTTTAATAGAAAAAGAAAATTATAAAAAAACATACCTTTGTTTAAGTGATTATTTC ACAATTCAAAAATATGAAATAAATAATTATGCAAAAGAAGAAAGTGATATAAATAGATTTTATTTATTCACGTGTGTAGA TGGATGCGGAACTATAAAATATAAAAATGGCGAAGAAAAGATAGTAATGGGAGATAGTATATTCATACCTGCAACTATGG GAGAATATGAATTAATAGGAAAATTCACATTATTAAAGAGCTATGTACCAGATGTAGAAAAAGAACAAAATGAAATTTTA AGTGTAATAAAAAGATAA
Upstream 100 bases:
>100_bases TAATTTAATTTTAACATAATGTAATTCACCTCATAAAAGTTTTACTATATAATATAACTATAATAATTAGAAATATTAAT ATATTCATTAGGAGGGTAAT
Downstream 100 bases:
>100_bases AGATAAGTCCAAGTTGGTGAATGTCACTAACTTGGACTTTTATTAAAAAATTTATATTCATATATCAACACTTTACTATG ATTAAATTCCTTTAGGAGAA
Product: mannose-6-phosphate isomerase, class I
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MYPIKFKNLYYDRIWGGNALKKFRSNIPNGVIGESWDVACHPNGVGEVENGSLKGKKFDEIINEFKEKLIGEKIDIKKFP LLIKLITSGDKLSVQVHPNDEYANRVENEFGKTEAWYVIDAEENASLIVGTKDCDKEIFKKAIKDGNLDKYLNKMPVKKG DFFYVQSGLVHAICEGVLIAEIQQSSDITYRVYDYNRGREIHVEKALDVIDFSLEGKNSKGILIEKENYKKTYLCLSDYF TIQKYEINNYAKEESDINRFYLFTCVDGCGTIKYKNGEEKIVMGDSIFIPATMGEYELIGKFTLLKSYVPDVEKEQNEIL SVIKR
Sequences:
>Translated_325_residues MYPIKFKNLYYDRIWGGNALKKFRSNIPNGVIGESWDVACHPNGVGEVENGSLKGKKFDEIINEFKEKLIGEKIDIKKFP LLIKLITSGDKLSVQVHPNDEYANRVENEFGKTEAWYVIDAEENASLIVGTKDCDKEIFKKAIKDGNLDKYLNKMPVKKG DFFYVQSGLVHAICEGVLIAEIQQSSDITYRVYDYNRGREIHVEKALDVIDFSLEGKNSKGILIEKENYKKTYLCLSDYF TIQKYEINNYAKEESDINRFYLFTCVDGCGTIKYKNGEEKIVMGDSIFIPATMGEYELIGKFTLLKSYVPDVEKEQNEIL SVIKR >Mature_325_residues MYPIKFKNLYYDRIWGGNALKKFRSNIPNGVIGESWDVACHPNGVGEVENGSLKGKKFDEIINEFKEKLIGEKIDIKKFP LLIKLITSGDKLSVQVHPNDEYANRVENEFGKTEAWYVIDAEENASLIVGTKDCDKEIFKKAIKDGNLDKYLNKMPVKKG DFFYVQSGLVHAICEGVLIAEIQQSSDITYRVYDYNRGREIHVEKALDVIDFSLEGKNSKGILIEKENYKKTYLCLSDYF TIQKYEINNYAKEESDINRFYLFTCVDGCGTIKYKNGEEKIVMGDSIFIPATMGEYELIGKFTLLKSYVPDVEKEQNEIL SVIKR
Specific function: Unknown
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR014628 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 37289; Mature: 37289
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPIKFKNLYYDRIWGGNALKKFRSNIPNGVIGESWDVACHPNGVGEVENGSLKGKKFDE CCCEEECCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHH IINEFKEKLIGEKIDIKKFPLLIKLITSGDKLSVQVHPNDEYANRVENEFGKTEAWYVID HHHHHHHHHCCCCCCCHHCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEE AEENASLIVGTKDCDKEIFKKAIKDGNLDKYLNKMPVKKGDFFYVQSGLVHAICEGVLIA CCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCHHHHHHCCHHEE EIQQSSDITYRVYDYNRGREIHVEKALDVIDFSLEGKNSKGILIEKENYKKTYLCLSDYF EECCCCCCEEEEEECCCCCEEEHHHHHEEEEEEECCCCCCCEEEECCCCCEEEEEEECCE TIQKYEINNYAKEESDINRFYLFTCVDGCGTIKYKNGEEKIVMGDSIFIPATMGEYELIG EEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEECCCEEEEECCCCCHHHH KFTLLKSYVPDVEKEQNEILSVIKR HHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MYPIKFKNLYYDRIWGGNALKKFRSNIPNGVIGESWDVACHPNGVGEVENGSLKGKKFDE CCCEEECCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHH IINEFKEKLIGEKIDIKKFPLLIKLITSGDKLSVQVHPNDEYANRVENEFGKTEAWYVID HHHHHHHHHCCCCCCCHHCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEE AEENASLIVGTKDCDKEIFKKAIKDGNLDKYLNKMPVKKGDFFYVQSGLVHAICEGVLIA CCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCHHHHHHCCHHEE EIQQSSDITYRVYDYNRGREIHVEKALDVIDFSLEGKNSKGILIEKENYKKTYLCLSDYF EECCCCCCEEEEEECCCCCEEEHHHHHEEEEEEECCCCCCCEEEECCCCCEEEEEEECCE TIQKYEINNYAKEESDINRFYLFTCVDGCGTIKYKNGEEKIVMGDSIFIPATMGEYELIG EEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEECCCEEEEECCCCCHHHH KFTLLKSYVPDVEKEQNEILSVIKR HHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8293960; 12397186 [H]