| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is pyk1 [H]
Identifier: 187935594
GI number: 187935594
Start: 2915512
End: 2916531
Strand: Reverse
Name: pyk1 [H]
Synonym: CLL_A2841
Alternate gene names: 187935594
Gene position: 2916531-2915512 (Counterclockwise)
Preceding gene: 187933058
Following gene: 187932572
Centisome position: 76.74
GC content: 24.61
Gene sequence:
>1020_bases ATGTATATTATTGCTACAGTAGGACCTAATATAATGGATAAAAAAGTATTAAAAGATATATTTTATAGCGGTGCAAATTC ATTAAGATTTAACTTTTCACATGGCAATAGTAAGGAATTTTTAGAATATATTGAAATGGCAAAGGCGATAAAAGAAGATG TAGTTATAATATTAGATTTGTGTGGAAGCAAAATAAGAGTTTCTAATAAGCTTTTTGGTATATGCAGAATATATAATGAA GAAAAAGTTTATTTTTGTGGAGAAGATAAATATAAACAAGTAAATCAAAAATTAAAAAATAATAATAAAATAGTTCCTTT AAATATAAGTAATAATGTTCTTATGGAAAATAATTATGATGAAATAAGTATTAAAGATAATACTATGATATTTAATATAT TAGGAAAAGAAGAGGGTTTTTTAAAAGCAGATACTGTAAGAGGTGGAGTTATACGGGCTGGAAAAGGATGCAATATAAAA GGTTTTGATAGAAGTAAAATAAAACTTAACTTAAAAGATAAAGAGGATATAAAATTTGGAATAGAACATAAGGTAGATAT AATATGTCAATCATTTGTTGAAAGTGATGAATGTATAAATGAAATAATAGAATTTATAGATTTAAATAAAAAAGAAGATT ATAATCCTAAAATATGGGCTAAAATTGAAACTTTAGAGGGAATAAAAAATATAGATAAGATAGTATCTAAAGTAGGGGGG ATTATGGTTGGAAGAGGTGATTTGATAGCTGAGACTTCCATAGAAGATACACCTATATATGAAGAATTTATAATAAAAAG AGTAAAAGAATATACTGATAAAGAAATTATAATAGCGACACACATTTTAGATAATATGAAAAGTGGAAAAATGCCATGTA TAAGTGAAGTGGAAAGTATATATAACTTTATTAAAAATGGAGTAGATGGTTTTTTATTAGCAGGAGAAACTTCTATTGGG AGAGCTCCTATAAAAACAGTTAAATTTTTAAAAGACCTAATAGAAAAGTATGAAGGATAA
Upstream 100 bases:
>100_bases TGAAATTTAAAACATATCCCAATAAAGATATTATTGTGATATTTATAATTTTAATGAGTATGAATTATAAAGAGAGATAA TAGTTTTTTAAGGAGGGTAT
Downstream 100 bases:
>100_bases AAAAATATATGATGTATTAAAAGATGGCTTAATGTCTATAACATGGGTAATTATAATGATAGTTACTTTTAAATTATTGA AGATAGTTTATAAAATGTTT
Product: pyruvate kinase, barrel domain
Products: NA
Alternate protein names: PK 1 [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MYIIATVGPNIMDKKVLKDIFYSGANSLRFNFSHGNSKEFLEYIEMAKAIKEDVVIILDLCGSKIRVSNKLFGICRIYNE EKVYFCGEDKYKQVNQKLKNNNKIVPLNISNNVLMENNYDEISIKDNTMIFNILGKEEGFLKADTVRGGVIRAGKGCNIK GFDRSKIKLNLKDKEDIKFGIEHKVDIICQSFVESDECINEIIEFIDLNKKEDYNPKIWAKIETLEGIKNIDKIVSKVGG IMVGRGDLIAETSIEDTPIYEEFIIKRVKEYTDKEIIIATHILDNMKSGKMPCISEVESIYNFIKNGVDGFLLAGETSIG RAPIKTVKFLKDLIEKYEG
Sequences:
>Translated_339_residues MYIIATVGPNIMDKKVLKDIFYSGANSLRFNFSHGNSKEFLEYIEMAKAIKEDVVIILDLCGSKIRVSNKLFGICRIYNE EKVYFCGEDKYKQVNQKLKNNNKIVPLNISNNVLMENNYDEISIKDNTMIFNILGKEEGFLKADTVRGGVIRAGKGCNIK GFDRSKIKLNLKDKEDIKFGIEHKVDIICQSFVESDECINEIIEFIDLNKKEDYNPKIWAKIETLEGIKNIDKIVSKVGG IMVGRGDLIAETSIEDTPIYEEFIIKRVKEYTDKEIIIATHILDNMKSGKMPCISEVESIYNFIKNGVDGFLLAGETSIG RAPIKTVKFLKDLIEKYEG >Mature_339_residues MYIIATVGPNIMDKKVLKDIFYSGANSLRFNFSHGNSKEFLEYIEMAKAIKEDVVIILDLCGSKIRVSNKLFGICRIYNE EKVYFCGEDKYKQVNQKLKNNNKIVPLNISNNVLMENNYDEISIKDNTMIFNILGKEEGFLKADTVRGGVIRAGKGCNIK GFDRSKIKLNLKDKEDIKFGIEHKVDIICQSFVESDECINEIIEFIDLNKKEDYNPKIWAKIETLEGIKNIDKIVSKVGG IMVGRGDLIAETSIEDTPIYEEFIIKRVKEYTDKEIIIATHILDNMKSGKMPCISEVESIYNFIKNGVDGFLLAGETSIG RAPIKTVKFLKDLIEKYEG
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI32967597, Length=352, Percent_Identity=29.5454545454545, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI10835121, Length=352, Percent_Identity=29.5454545454545, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI33286418, Length=350, Percent_Identity=28.2857142857143, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI33286422, Length=350, Percent_Identity=28.2857142857143, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI33286420, Length=350, Percent_Identity=28.2857142857143, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI310128732, Length=295, Percent_Identity=28.135593220339, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI310128730, Length=295, Percent_Identity=28.135593220339, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI310128736, Length=243, Percent_Identity=26.7489711934156, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI310128734, Length=243, Percent_Identity=26.7489711934156, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1787965, Length=353, Percent_Identity=28.328611898017, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1788160, Length=344, Percent_Identity=27.0348837209302, Blast_Score=103, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17544584, Length=350, Percent_Identity=27.1428571428571, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17506831, Length=357, Percent_Identity=26.6106442577031, Blast_Score=101, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17506829, Length=357, Percent_Identity=26.6106442577031, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71984406, Length=357, Percent_Identity=26.6106442577031, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71984413, Length=357, Percent_Identity=26.6106442577031, Blast_Score=100, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6319279, Length=337, Percent_Identity=28.1899109792285, Blast_Score=123, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6324923, Length=346, Percent_Identity=27.4566473988439, Blast_Score=117, Evalue=3e-27, Organism=Drosophila melanogaster, GI24648964, Length=340, Percent_Identity=28.5294117647059, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI28571814, Length=340, Percent_Identity=28.5294117647059, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24648966, Length=344, Percent_Identity=27.6162790697674, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24646914, Length=168, Percent_Identity=29.7619047619048, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI24581235, Length=353, Percent_Identity=24.6458923512748, Blast_Score=85, Evalue=5e-17,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 38561; Mature: 38561
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIIATVGPNIMDKKVLKDIFYSGANSLRFNFSHGNSKEFLEYIEMAKAIKEDVVIILDL CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCEEEEEEC CGSKIRVSNKLFGICRIYNEEKVYFCGEDKYKQVNQKLKNNNKIVPLNISNNVLMENNYD CCCEEEECCCEEEEEEEECCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCC EISIKDNTMIFNILGKEEGFLKADTVRGGVIRAGKGCNIKGFDRSKIKLNLKDKEDIKFG EEEEECCEEEEEEECCCCCCEEECCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCEEC IEHKVDIICQSFVESDECINEIIEFIDLNKKEDYNPKIWAKIETLEGIKNIDKIVSKVGG CCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCC IMVGRGDLIAETSIEDTPIYEEFIIKRVKEYTDKEIIIATHILDNMKSGKMPCISEVESI EEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCHHHHHHHH YNFIKNGVDGFLLAGETSIGRAPIKTVKFLKDLIEKYEG HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYIIATVGPNIMDKKVLKDIFYSGANSLRFNFSHGNSKEFLEYIEMAKAIKEDVVIILDL CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCEEEEEEC CGSKIRVSNKLFGICRIYNEEKVYFCGEDKYKQVNQKLKNNNKIVPLNISNNVLMENNYD CCCEEEECCCEEEEEEEECCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCC EISIKDNTMIFNILGKEEGFLKADTVRGGVIRAGKGCNIKGFDRSKIKLNLKDKEDIKFG EEEEECCEEEEEEECCCCCCEEECCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCEEC IEHKVDIICQSFVESDECINEIIEFIDLNKKEDYNPKIWAKIETLEGIKNIDKIVSKVGG CCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCC IMVGRGDLIAETSIEDTPIYEEFIIKRVKEYTDKEIIIATHILDNMKSGKMPCISEVESI EEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCHHHHHHHH YNFIKNGVDGFLLAGETSIGRAPIKTVKFLKDLIEKYEG HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]