| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935588
Identifier: 187935588
GI number: 187935588
Start: 706111
End: 706659
Strand: Reverse
Name: 187935588
Synonym: CLL_A0704
Alternate gene names: NA
Gene position: 706659-706111 (Counterclockwise)
Preceding gene: 187933066
Following gene: 187933168
Centisome position: 18.59
GC content: 32.24
Gene sequence:
>549_bases ATGTACTATTTTGATAAAAAAATTAGGAAGGAAGTATCAGTACCTTATCCATTATACCAATCAGAAAAGGGAGAGTACTT CATTGGTCAGACACCAAAATTAATTGGTGAAGATCAGCATGCTTTAGCTGCATTAGTAAATCCTATTGGTTCAAAAGTAA ATATTTATGTGAATGCTATAACTGTAACAAATATTTCAACTCTTAATTTATCAGCTGAATTTTACCTTAGAGCTACCCTA AAGAAAGGTATGGTTAGTGATTCAGTTAGCTGTACTAACTTAGGTATTATTCCAAAACCAATTCCTGAAGGAAAAATTAA ATATTTAACTACAGTTACTAAACCACCTCAAGATGGTGTAAATATATTTAGTCGAATAGTTTCTTCATATTCAACTTTAG TAATTGATGGTGGACAGATAATTATTTCGCCTGGACAATCTCTTATAGTTTATCTTGGAGGATTTCTTCCACTTGAATTT GATAGTGCAATAGTTGCTTTCGGATGGTGGGAAGAAACAATATACGAGTATCCATGCTGCCATTGCTAA
Upstream 100 bases:
>100_bases CTTTTTATATTTAATTCATCACATGTCTTATGTATTGTAAATATAATATAAATAGGAACTATTAAATTCCAGTAAAATTT TTTCTATGTAGGTGATTAAA
Downstream 100 bases:
>100_bases AATAAAACTTTTTTATTAACCTATAAATATTTTAAATATTAAAATCCACGATATTTCTGTCGTGGATTTTTTAGTATAAA TTAAGTGTAACTCTTTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MYYFDKKIRKEVSVPYPLYQSEKGEYFIGQTPKLIGEDQHALAALVNPIGSKVNIYVNAITVTNISTLNLSAEFYLRATL KKGMVSDSVSCTNLGIIPKPIPEGKIKYLTTVTKPPQDGVNIFSRIVSSYSTLVIDGGQIIISPGQSLIVYLGGFLPLEF DSAIVAFGWWEETIYEYPCCHC
Sequences:
>Translated_182_residues MYYFDKKIRKEVSVPYPLYQSEKGEYFIGQTPKLIGEDQHALAALVNPIGSKVNIYVNAITVTNISTLNLSAEFYLRATL KKGMVSDSVSCTNLGIIPKPIPEGKIKYLTTVTKPPQDGVNIFSRIVSSYSTLVIDGGQIIISPGQSLIVYLGGFLPLEF DSAIVAFGWWEETIYEYPCCHC >Mature_182_residues MYYFDKKIRKEVSVPYPLYQSEKGEYFIGQTPKLIGEDQHALAALVNPIGSKVNIYVNAITVTNISTLNLSAEFYLRATL KKGMVSDSVSCTNLGIIPKPIPEGKIKYLTTVTKPPQDGVNIFSRIVSSYSTLVIDGGQIIISPGQSLIVYLGGFLPLEF DSAIVAFGWWEETIYEYPCCHC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20184; Mature: 20184
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYFDKKIRKEVSVPYPLYQSEKGEYFIGQTPKLIGEDQHALAALVNPIGSKVNIYVNAI CCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCHHCCCCHHHHHHHHHCCCCEEEEEEEEE TVTNISTLNLSAEFYLRATLKKGMVSDSVSCTNLGIIPKPIPEGKIKYLTTVTKPPQDGV EEEEEEEEEECHHEEEEEHHHCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCHHH NIFSRIVSSYSTLVIDGGQIIISPGQSLIVYLGGFLPLEFDSAIVAFGWWEETIYEYPCC HHHHHHHHCCCEEEEECCEEEECCCCEEEEEECCCCEEECCCEEEEEECHHHHHHCCCCC HC CC >Mature Secondary Structure MYYFDKKIRKEVSVPYPLYQSEKGEYFIGQTPKLIGEDQHALAALVNPIGSKVNIYVNAI CCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCHHCCCCHHHHHHHHHCCCCEEEEEEEEE TVTNISTLNLSAEFYLRATLKKGMVSDSVSCTNLGIIPKPIPEGKIKYLTTVTKPPQDGV EEEEEEEEEECHHEEEEEHHHCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCHHH NIFSRIVSSYSTLVIDGGQIIISPGQSLIVYLGGFLPLEFDSAIVAFGWWEETIYEYPCC HHHHHHHHCCCEEEEECCEEEECCCCEEEEEECCCCEEECCCEEEEEECHHHHHHCCCCC HC CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA