| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935529
Identifier: 187935529
GI number: 187935529
Start: 2481380
End: 2481871
Strand: Reverse
Name: 187935529
Synonym: CLL_A2391
Alternate gene names: NA
Gene position: 2481871-2481380 (Counterclockwise)
Preceding gene: 187933759
Following gene: 187935192
Centisome position: 65.31
GC content: 24.19
Gene sequence:
>492_bases ATGGATTTTAGTGAATTAAATTTAAATGAGGAACAATTACAAGGAGTTCAAAAAATAGTTCAAAGTGAAAATGACAAAAT TAGAACTGAATACTCAAAAAAGATTAAAGAGTTAGAATATAATGTACCTAAGAAAAAGTCACCAGAAGAAATTGCATTAG AAGAAAGAATTAAAGAAATAGAAGAAAAAGAAAAGGCTCTACAAAAACAAGAACAATTATCTAATATAAATAAAGCTTTA GAAGAAAAGGGGTTAAATCCACAACTTTCAAAATTTATAAATATGGAAGGGGTTGAAGATATAGAAACTTCTCTTGATGA ATTATTTAATTTAGTAGTTGGTGAATCTAAAGAAAAAATATATAAACCATCAGATCATATTAATTCTATTAATAGTGGAA TTACAAGGGAAGATTTTAACAAGATGGGATATAAAGAAAGATTAGATTTATATAATACAGATAAAGATTTATATGACTCA TTAAGTAAATAA
Upstream 100 bases:
>100_bases AGAGGATTATTTGTAGTGTTATTTCTTACAAACAATTCATTAATAATACAAGTTGAAAATGATGAAGATTTATTAATTGA TTTAATGGAGGTATCAAGCT
Downstream 100 bases:
>100_bases GATAATTAGGCTTTTAGAGATAATCTAAAGGCTTTTTTTATATAAAAAATTAGGAAAGAAGGAATTTTTAATGGCAATTA TAGTACCAGATGTATATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MDFSELNLNEEQLQGVQKIVQSENDKIRTEYSKKIKELEYNVPKKKSPEEIALEERIKEIEEKEKALQKQEQLSNINKAL EEKGLNPQLSKFINMEGVEDIETSLDELFNLVVGESKEKIYKPSDHINSINSGITREDFNKMGYKERLDLYNTDKDLYDS LSK
Sequences:
>Translated_163_residues MDFSELNLNEEQLQGVQKIVQSENDKIRTEYSKKIKELEYNVPKKKSPEEIALEERIKEIEEKEKALQKQEQLSNINKAL EEKGLNPQLSKFINMEGVEDIETSLDELFNLVVGESKEKIYKPSDHINSINSGITREDFNKMGYKERLDLYNTDKDLYDS LSK >Mature_163_residues MDFSELNLNEEQLQGVQKIVQSENDKIRTEYSKKIKELEYNVPKKKSPEEIALEERIKEIEEKEKALQKQEQLSNINKAL EEKGLNPQLSKFINMEGVEDIETSLDELFNLVVGESKEKIYKPSDHINSINSGITREDFNKMGYKERLDLYNTDKDLYDS LSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19048; Mature: 19048
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSELNLNEEQLQGVQKIVQSENDKIRTEYSKKIKELEYNVPKKKSPEEIALEERIKEI CCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH EEKEKALQKQEQLSNINKALEEKGLNPQLSKFINMEGVEDIETSLDELFNLVVGESKEKI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH YKPSDHINSINSGITREDFNKMGYKERLDLYNTDKDLYDSLSK CCCHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure MDFSELNLNEEQLQGVQKIVQSENDKIRTEYSKKIKELEYNVPKKKSPEEIALEERIKEI CCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH EEKEKALQKQEQLSNINKALEEKGLNPQLSKFINMEGVEDIETSLDELFNLVVGESKEKI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH YKPSDHINSINSGITREDFNKMGYKERLDLYNTDKDLYDSLSK CCCHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA