| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935516
Identifier: 187935516
GI number: 187935516
Start: 3270790
End: 3272121
Strand: Reverse
Name: 187935516
Synonym: CLL_A3156
Alternate gene names: NA
Gene position: 3272121-3270790 (Counterclockwise)
Preceding gene: 187932753
Following gene: 187934091
Centisome position: 86.1
GC content: 25.68
Gene sequence:
>1332_bases GTGGATTTTAATAACAAAAAAGAAGAACTTTTAAAAAAAGCGTATAATATAAAAAGTATTGATGAACTTGATAACATGTA TATAAAGAGTTTTTTTGAATTAGTTGAACAGGTTATTCTTGATTTATTAGAAAGTGAAGATTCATTTTTTGGCCAATTTA TGTTAAGAGTAAAAAGGCAAATAAGAATTGACTTGAAGTCTCCTATAGCTACTATTCCTAAAAGAAATGGATTTAATATG TACTTTAATCCTATATTATTTTTACAATGTGAAAAGAAAGAAATGTCAGCATTATTTAAGCATGAGATTTATCATATAAT GTATTCACATTTTTCTAGAGAGAGAAAAATGAAAGAAAGATTAAGTAAGGAAGCTATAAATACTGCACTAGATATTTCGA TAAATCAATATATAAAAAATCTTCCACCTTGGAGCAAAAAGATTAATTCCATAAACATAGAGTATAACTTAAATTTAAAA GAAGATAGAAGTGCTGAGGAATATGCAGAAGAAATTTATAAATCAATTAAATTAAGAATAAAGGAACCTAAAATTGACAA AGAAGAGTCATTAGATGAAATTAATTTAGAAAATGCTCATGATATATGGGAAGAAATAGATGTATCTCAAGAAGATATAG AAAGTTTAACTAAAAAGACAGCAATTAGTATATATGATGAAAATATGCCAAGTGATATTGAAGATATAATTTTAAGTTAT AGGGAAAAAGCAGAAATATCTTGGCAAAGAATATTAAAAAATATATTACCAGCTATAAAAAGTGGATATAAGAAAACTAC AACTAGAAGAAATAGAAGACAACCTAATAGGTTAGATTTGAGGGGAAGATTACCTAAAAATGAATCTGAACTAATAGTTG CAATTGATATAAGCGCAAGTATGAGTGATGATACTTTACATAAAATTTTAGTTGAAATATTAGAGATAAGTAAAACTATA AATAATACTATAACAATAATAGAATGTGATGATACTATTAAAAGAGTGTATAAATTAAGAAGTGAGAAAGATATAAAAAA AAGATATGAAAATAATGGGGCAACTGCTTTTACACCAGTATTTAAGTACATATTAGAAAATAATTTAAGAAATTCTATAT TAATTTATTTTACAGATGGTGTAGGTGAAAAGGAATTAGATATAAAGCCGTTGAATAAAAGAATAATATGGGTGTTAATT GGTTCAGAAGAATTCTCGTTAAAAAATCATTATGGAACGGTAAAAAGAATAAGCAGTGATAAAGAAGAAAAGGTTGAGGG CAATGTTGGATTACGTATGGTTAATTCGGTAATACATGACTGGGCTAGATAA
Upstream 100 bases:
>100_bases ATGTTAATATATAGGTAAAGTTTATCAGAGTAGTTAAATTTAATAATATTAAGTATAGTTACATTAAATAAACATTAATA CAATTTAAAGGAGGAGTTAT
Downstream 100 bases:
>100_bases TTAGGAACGATTTAAACTACAGATAATTAAATGAGGAACTAAGGAGAGAAAGTTTGAGTAAAAAATTTAAAGTAAGAGAT TATGCGATTATTATAACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MDFNNKKEELLKKAYNIKSIDELDNMYIKSFFELVEQVILDLLESEDSFFGQFMLRVKRQIRIDLKSPIATIPKRNGFNM YFNPILFLQCEKKEMSALFKHEIYHIMYSHFSRERKMKERLSKEAINTALDISINQYIKNLPPWSKKINSINIEYNLNLK EDRSAEEYAEEIYKSIKLRIKEPKIDKEESLDEINLENAHDIWEEIDVSQEDIESLTKKTAISIYDENMPSDIEDIILSY REKAEISWQRILKNILPAIKSGYKKTTTRRNRRQPNRLDLRGRLPKNESELIVAIDISASMSDDTLHKILVEILEISKTI NNTITIIECDDTIKRVYKLRSEKDIKKRYENNGATAFTPVFKYILENNLRNSILIYFTDGVGEKELDIKPLNKRIIWVLI GSEEFSLKNHYGTVKRISSDKEEKVEGNVGLRMVNSVIHDWAR
Sequences:
>Translated_443_residues MDFNNKKEELLKKAYNIKSIDELDNMYIKSFFELVEQVILDLLESEDSFFGQFMLRVKRQIRIDLKSPIATIPKRNGFNM YFNPILFLQCEKKEMSALFKHEIYHIMYSHFSRERKMKERLSKEAINTALDISINQYIKNLPPWSKKINSINIEYNLNLK EDRSAEEYAEEIYKSIKLRIKEPKIDKEESLDEINLENAHDIWEEIDVSQEDIESLTKKTAISIYDENMPSDIEDIILSY REKAEISWQRILKNILPAIKSGYKKTTTRRNRRQPNRLDLRGRLPKNESELIVAIDISASMSDDTLHKILVEILEISKTI NNTITIIECDDTIKRVYKLRSEKDIKKRYENNGATAFTPVFKYILENNLRNSILIYFTDGVGEKELDIKPLNKRIIWVLI GSEEFSLKNHYGTVKRISSDKEEKVEGNVGLRMVNSVIHDWAR >Mature_443_residues MDFNNKKEELLKKAYNIKSIDELDNMYIKSFFELVEQVILDLLESEDSFFGQFMLRVKRQIRIDLKSPIATIPKRNGFNM YFNPILFLQCEKKEMSALFKHEIYHIMYSHFSRERKMKERLSKEAINTALDISINQYIKNLPPWSKKINSINIEYNLNLK EDRSAEEYAEEIYKSIKLRIKEPKIDKEESLDEINLENAHDIWEEIDVSQEDIESLTKKTAISIYDENMPSDIEDIILSY REKAEISWQRILKNILPAIKSGYKKTTTRRNRRQPNRLDLRGRLPKNESELIVAIDISASMSDDTLHKILVEILEISKTI NNTITIIECDDTIKRVYKLRSEKDIKKRYENNGATAFTPVFKYILENNLRNSILIYFTDGVGEKELDIKPLNKRIIWVLI GSEEFSLKNHYGTVKRISSDKEEKVEGNVGLRMVNSVIHDWAR
Specific function: Unknown
COG id: COG3864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018698 [H]
Pfam domain/function: PF09967 DUF2201 [H]
EC number: NA
Molecular weight: Translated: 52206; Mature: 52206
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFNNKKEELLKKAYNIKSIDELDNMYIKSFFELVEQVILDLLESEDSFFGQFMLRVKRQ CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH IRIDLKSPIATIPKRNGFNMYFNPILFLQCEKKEMSALFKHEIYHIMYSHFSRERKMKER HHCCCCCCHHHCCCCCCCCEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSKEAINTALDISINQYIKNLPPWSKKINSINIEYNLNLKEDRSAEEYAEEIYKSIKLRI HHHHHHHHHHHCCHHHHHHCCCCHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHEEE KEPKIDKEESLDEINLENAHDIWEEIDVSQEDIESLTKKTAISIYDENMPSDIEDIILSY CCCCCCCHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH REKAEISWQRILKNILPAIKSGYKKTTTRRNRRQPNRLDLRGRLPKNESELIVAIDISAS HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCC MSDDTLHKILVEILEISKTINNTITIIECDDTIKRVYKLRSEKDIKKRYENNGATAFTPV CCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHH FKYILENNLRNSILIYFTDGVGEKELDIKPLNKRIIWVLIGSEEFSLKNHYGTVKRISSD HHHHHHCCCCCCEEEEEECCCCCCCCCCEECCCEEEEEEECCCCCCHHHHCCHHHHHCCC KEEKVEGNVGLRMVNSVIHDWAR HHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MDFNNKKEELLKKAYNIKSIDELDNMYIKSFFELVEQVILDLLESEDSFFGQFMLRVKRQ CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH IRIDLKSPIATIPKRNGFNMYFNPILFLQCEKKEMSALFKHEIYHIMYSHFSRERKMKER HHCCCCCCHHHCCCCCCCCEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSKEAINTALDISINQYIKNLPPWSKKINSINIEYNLNLKEDRSAEEYAEEIYKSIKLRI HHHHHHHHHHHCCHHHHHHCCCCHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHEEE KEPKIDKEESLDEINLENAHDIWEEIDVSQEDIESLTKKTAISIYDENMPSDIEDIILSY CCCCCCCHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH REKAEISWQRILKNILPAIKSGYKKTTTRRNRRQPNRLDLRGRLPKNESELIVAIDISAS HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCC MSDDTLHKILVEILEISKTINNTITIIECDDTIKRVYKLRSEKDIKKRYENNGATAFTPV CCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHH FKYILENNLRNSILIYFTDGVGEKELDIKPLNKRIIWVLIGSEEFSLKNHYGTVKRISSD HHHHHHCCCCCCEEEEEECCCCCCCCCCEECCCEEEEEEECCCCCCHHHHCCHHHHHCCC KEEKVEGNVGLRMVNSVIHDWAR HHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8168477; 10360571 [H]