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The map label for this gene is ytfE [C]

Identifier: 187935483

GI number: 187935483

Start: 2131037

End: 2131753

Strand: Reverse

Name: ytfE [C]

Synonym: CLL_A2036

Alternate gene names: 187935483

Gene position: 2131753-2131037 (Counterclockwise)

Preceding gene: 187934626

Following gene: 187933100

Centisome position: 56.09

GC content: 27.62

Gene sequence:

>717_bases
ATGAATAAATTTAATAGTAATCAAAAAATAGGTGATATAGTAACGAAATTTCCAAAGGTAGCAGATATATTTAAAGAATA
TAAAATTGATTTTTGTTGCGGTGGCGATAGGACATTAATTACAGCTATAAAAGAGCAAGGGGTCAATGAAACAGAACTAT
TAGAAAGAATAAATGATTCCTATGAGAAATTAAAAAATAATATTTACTCAAAAGATAGAAATTGGGTGGAAGCACCTCTT
GATGAATTAGTTGATCAGATAGTAAATGTACATCATGCTTATCTTTATGAGAACCTTCCTAAAATAAGTGAACTAACAAC
TAAAATATTAAGGGTTCATGGAGAAAAACACCCAGAGCTTTCAAGAGTTCATAAGTTATTTCACACTATTAAGATGGAAT
TAGAAGCTCATTTAATAGAGGAAGAGACAATTCAATATCCAGCAATTAATGCATATTTAAGAAGTAATAGTGAAGCTGAT
TTAGATAAAGCAATAAACATTATTAATCAATTGCAAGATGAACACATCGGAGCTGGAAATATACTTAAAGAATTAAGAGA
AATAACTAATGATTATGATCTTCCAAGTAATGGGTGTACTACTTATAGATTAACTTATTTTAAACTACAAGAAATGGAAT
CAGATATGTTTCAACATATACATTTAGAAAGCAATATACTATTTCCGAGACTTTACGAATTAAAAAATAAAAAATAA

Upstream 100 bases:

>100_bases
AAATAAATAAAGCTATAATAAAGCCATAAGTTAAAGAAAAAGCAAATAATGAAATTAATAAAAGATTGTTTTAAATATAC
AATTTAGGAGGAATAAATAA

Downstream 100 bases:

>100_bases
TTAATAAAGGAGGAATTAAATATGGATAATAAAAAGATAGAAAAATTAACTGAAGTTTTACAAAAATTAAATCAGGTGGG
TTTAACAGAAACTTTAAGAA

Product: nitric oxide-dependent regulator

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNKFNSNQKIGDIVTKFPKVADIFKEYKIDFCCGGDRTLITAIKEQGVNETELLERINDSYEKLKNNIYSKDRNWVEAPL
DELVDQIVNVHHAYLYENLPKISELTTKILRVHGEKHPELSRVHKLFHTIKMELEAHLIEEETIQYPAINAYLRSNSEAD
LDKAINIINQLQDEHIGAGNILKELREITNDYDLPSNGCTTYRLTYFKLQEMESDMFQHIHLESNILFPRLYELKNKK

Sequences:

>Translated_238_residues
MNKFNSNQKIGDIVTKFPKVADIFKEYKIDFCCGGDRTLITAIKEQGVNETELLERINDSYEKLKNNIYSKDRNWVEAPL
DELVDQIVNVHHAYLYENLPKISELTTKILRVHGEKHPELSRVHKLFHTIKMELEAHLIEEETIQYPAINAYLRSNSEAD
LDKAINIINQLQDEHIGAGNILKELREITNDYDLPSNGCTTYRLTYFKLQEMESDMFQHIHLESNILFPRLYELKNKK
>Mature_238_residues
MNKFNSNQKIGDIVTKFPKVADIFKEYKIDFCCGGDRTLITAIKEQGVNETELLERINDSYEKLKNNIYSKDRNWVEAPL
DELVDQIVNVHHAYLYENLPKISELTTKILRVHGEKHPELSRVHKLFHTIKMELEAHLIEEETIQYPAINAYLRSNSEAD
LDKAINIINQLQDEHIGAGNILKELREITNDYDLPSNGCTTYRLTYFKLQEMESDMFQHIHLESNILFPRLYELKNKK

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=224, Percent_Identity=31.6964285714286, Blast_Score=130, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 27880; Mature: 27880

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFNSNQKIGDIVTKFPKVADIFKEYKIDFCCGGDRTLITAIKEQGVNETELLERINDS
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH
YEKLKNNIYSKDRNWVEAPLDELVDQIVNVHHAYLYENLPKISELTTKILRVHGEKHPEL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH
SRVHKLFHTIKMELEAHLIEEETIQYPAINAYLRSNSEADLDKAINIINQLQDEHIGAGN
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH
ILKELREITNDYDLPSNGCTTYRLTYFKLQEMESDMFQHIHLESNILFPRLYELKNKK
HHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MNKFNSNQKIGDIVTKFPKVADIFKEYKIDFCCGGDRTLITAIKEQGVNETELLERINDS
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH
YEKLKNNIYSKDRNWVEAPLDELVDQIVNVHHAYLYENLPKISELTTKILRVHGEKHPEL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH
SRVHKLFHTIKMELEAHLIEEETIQYPAINAYLRSNSEADLDKAINIINQLQDEHIGAGN
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH
ILKELREITNDYDLPSNGCTTYRLTYFKLQEMESDMFQHIHLESNILFPRLYELKNKK
HHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA