Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is 187935451

Identifier: 187935451

GI number: 187935451

Start: 2891228

End: 2891647

Strand: Reverse

Name: 187935451

Synonym: CLL_A2811

Alternate gene names: NA

Gene position: 2891647-2891228 (Counterclockwise)

Preceding gene: 187933162

Following gene: 187934707

Centisome position: 76.09

GC content: 26.19

Gene sequence:

>420_bases
ATGGAAAAGGATAACTCTTTGTTGTATGCATGCTACATAAATGATATGGATTTTATAGATGAACTTATAAATTGCCTTAA
CAGTATTGACTATAGTGAATTTGATGAAGAGTACATATATGAGTTACTTGATAGTAGAGATAGTGATCCATTTGATGCTG
AATGGTGTCGAGTTAATAAAAAAATTAATTCATTGAAAAATGACAAAAACTATACCAATCTTAATAAAGAAGTGCAAGGT
AAAATAAGAGAAAAAGTATTTATGATAATTAAAAAAAATACTAAGAGTGAACTTTCAGATTATGTTTCTGATGACTTTGG
ACTGATTTATGATAGTTTAATAGTAAATTATAAAGATGAATGGCTAAATAAATTGATTAAAGAATATAAAAATAGACGGA
TTCCTGCTGGAGAACTTTAA

Upstream 100 bases:

>100_bases
GATTTTTTACTCTCTATTAAAATGAAATATATGTATCTTTAATGACTAGAGAGGAAATAGACAAAAATCTTGATGTCTTG
TTTAAGAAAGGAGTTTAATT

Downstream 100 bases:

>100_bases
AACAAAGGAGTGGTGTTTTGGGAAAGTTTGAGGGTTTTAAAGAAAAAGTATATTTAGAGATATTAAATTTATTAAGAAAT
CATTTTACTAATTATGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MEKDNSLLYACYINDMDFIDELINCLNSIDYSEFDEEYIYELLDSRDSDPFDAEWCRVNKKINSLKNDKNYTNLNKEVQG
KIREKVFMIIKKNTKSELSDYVSDDFGLIYDSLIVNYKDEWLNKLIKEYKNRRIPAGEL

Sequences:

>Translated_139_residues
MEKDNSLLYACYINDMDFIDELINCLNSIDYSEFDEEYIYELLDSRDSDPFDAEWCRVNKKINSLKNDKNYTNLNKEVQG
KIREKVFMIIKKNTKSELSDYVSDDFGLIYDSLIVNYKDEWLNKLIKEYKNRRIPAGEL
>Mature_139_residues
MEKDNSLLYACYINDMDFIDELINCLNSIDYSEFDEEYIYELLDSRDSDPFDAEWCRVNKKINSLKNDKNYTNLNKEVQG
KIREKVFMIIKKNTKSELSDYVSDDFGLIYDSLIVNYKDEWLNKLIKEYKNRRIPAGEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16613; Mature: 16613

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00387 PPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKDNSLLYACYINDMDFIDELINCLNSIDYSEFDEEYIYELLDSRDSDPFDAEWCRVNK
CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH
KINSLKNDKNYTNLNKEVQGKIREKVFMIIKKNTKSELSDYVSDDFGLIYDSLIVNYKDE
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCHHH
WLNKLIKEYKNRRIPAGEL
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEKDNSLLYACYINDMDFIDELINCLNSIDYSEFDEEYIYELLDSRDSDPFDAEWCRVNK
CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH
KINSLKNDKNYTNLNKEVQGKIREKVFMIIKKNTKSELSDYVSDDFGLIYDSLIVNYKDE
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCHHH
WLNKLIKEYKNRRIPAGEL
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA