| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187935333
Identifier: 187935333
GI number: 187935333
Start: 2002445
End: 2002849
Strand: Reverse
Name: 187935333
Synonym: CLL_A1910
Alternate gene names: NA
Gene position: 2002849-2002445 (Counterclockwise)
Preceding gene: 187932754
Following gene: 187934368
Centisome position: 52.7
GC content: 32.59
Gene sequence:
>405_bases ATGAGTAGTACATTTGGATTTCAAGAGTTTATTAATAAAATAAATATAACTCAAAAGCAAATGAGCAATGTTATTAATGA AACTTTAGAAGAATCTGCAACAGAGTGCGTAGCAGAAGTGCAAGCAAGAACTCCTGTAAGGACAGGAAATTTAAGACGGT CATGGAATCATGGTGAGGTAGAAATAGAAAACAATACTCATTACATTGAAATAGGTTCAGCATTAGAGTATGCTCCAGCA GTAGAAAATGGATATAAGCAAGATGTAGGGAAATATATTCCTGCTATTGGAAAGAAACTTGTAAAAGAATATGTACCAGG TAAATATATGTTGCGGGATTCTTTAACTATAGCTAAAGCAGACTTACCCAATAAATTAAAAGCAAAGTTGAGTGATATTA AGTGA
Upstream 100 bases:
>100_bases TACTATAAAATTGAAGCAATACCTTGGGATGATGATTATCTCGAGGTTTTATTAAGTGAAACTAAAGATGTAAATATTAT TGAAACTGAGATAGTAAACA
Downstream 100 bases:
>100_bases TAAGATATGTGGATTTATTATATAGTATAAGCAAAACATTAAGAGAAAATTACCCAAAAGCAACAATTAAGATAGATAAA AAGAAAAGTGAAGAAGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSSTFGFQEFINKINITQKQMSNVINETLEESATECVAEVQARTPVRTGNLRRSWNHGEVEIENNTHYIEIGSALEYAPA VENGYKQDVGKYIPAIGKKLVKEYVPGKYMLRDSLTIAKADLPNKLKAKLSDIK
Sequences:
>Translated_134_residues MSSTFGFQEFINKINITQKQMSNVINETLEESATECVAEVQARTPVRTGNLRRSWNHGEVEIENNTHYIEIGSALEYAPA VENGYKQDVGKYIPAIGKKLVKEYVPGKYMLRDSLTIAKADLPNKLKAKLSDIK >Mature_133_residues SSTFGFQEFINKINITQKQMSNVINETLEESATECVAEVQARTPVRTGNLRRSWNHGEVEIENNTHYIEIGSALEYAPAV ENGYKQDVGKYIPAIGKKLVKEYVPGKYMLRDSLTIAKADLPNKLKAKLSDIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15077; Mature: 14946
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTFGFQEFINKINITQKQMSNVINETLEESATECVAEVQARTPVRTGNLRRSWNHGEV CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE EIENNTHYIEIGSALEYAPAVENGYKQDVGKYIPAIGKKLVKEYVPGKYMLRDSLTIAKA EECCCCEEEEECCHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCHHHHC DLPNKLKAKLSDIK CCCHHHHHHHHCCC >Mature Secondary Structure SSTFGFQEFINKINITQKQMSNVINETLEESATECVAEVQARTPVRTGNLRRSWNHGEV CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE EIENNTHYIEIGSALEYAPAVENGYKQDVGKYIPAIGKKLVKEYVPGKYMLRDSLTIAKA EECCCCEEEEECCHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCHHHHC DLPNKLKAKLSDIK CCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA