Click here to switch to the map view.

The map label for this gene is 187935289

Identifier: 187935289

GI number: 187935289

Start: 2159229

End: 2160611

Strand: Reverse

Name: 187935289

Synonym: CLL_A2064

Alternate gene names: NA

Gene position: 2160611-2159229 (Counterclockwise)

Preceding gene: 187934344

Following gene: 187932367

Centisome position: 56.85

GC content: 31.74

Gene sequence:

>1383_bases
ATGATTAAATTAACTAAGATTATTTCTACAATAATATTATCAACAATGATGGTTACATCACTTACAGCATGTTCAGGCGG
TAAAAACGGAGCTGCTTCATCAGGAGATACAATAAGTGTAAATTTCTGGACTGCTCCTCAAAAAGTTCAATATGATTACT
GGACAACCAAAGCAGAAGAATTTAATAAAACAAATACTGAAATTAATGGAAAAAGTATTAAATTAGTAGTTCAACAAATG
CCAGAAACACCATCTTCAGAAGCTGGAATTCAAAATGCTTTAGCAACTGATACAGCTCCGGCTATTTCAGAAAATGTAAA
TAGAGGATTTGCATCAACATTAGCAGCCTCAGATGCAATATATTCATTAGAATCAGAAGAATGGTTTAAAGATATAGTTA
AGAATAGAGCATTAGAAACAGTGATGCCAGGTTGGCAAATAGGTGGAAAACAGTTTGTATTACCTCAATATGTTAATCCA
ATGGTTTTACAATGGAATATGAAAGCTTTAAAAGAATTAGGAGTAGAAAAAGTTCCTGAAACTAAAACTGAAATTGAAAG
TTTAGTAGTTAAATTCAGAGAAAATGAAGCTAAGATGTCAGCTATGGGAGTTAGTCATGTATTCTATAGAAATTCATTAA
TTAGACCAGATCAATGGTGGGATAGATGGTCAGATTTCCAAAATATATACTTAGCATTTAGTGGTGGAGAACCTTGGGTA
GAAGGAAACAAGTTAGTTTTAGATAAAAACACAACTAAAGAAACTTTTGAATTCTTTGGATCATTAGGTGATACATTATT
AACATCAGAAATTCCTAATGTTTGGGCAGAAGAAAATCCACCAGTGTTATTTACAATAGCAGCACCATGGGAAATACAAG
CTCTAAGAGAAGGCGGAAAGAAATATGGTGAAGATTTCGAATATGGCCCAATGATAGTTAAAAATCAAGGTGATACATCA
TACAACTTTGCAGATTCAAAGGGATTAGTTTTATATAAAGATAATAATATTACAGACGAAATTCATGAAGGTGCAGTTGA
ATTTATCAAATGGTTATATAATGAAGAAAATTCAGCAAATACAGATTTAGAATGGTTACAAGCAACTACAATGTTACCTG
TTAGAGGTGATTTAATTACTAACGATACATTCAAAAAATACTTTGAAGAAAATCCAGAAGTAAAAGACTTAGCTAAACAT
GTACCAAATGCAATTCCATGTATGGCAAATGATAATATGACACCAATACAAGAAGCATTAGGAACTCAATTAGCAAAATA
TCTAGAAACTACATTATCATCAACAGATGTTAAAGCTAAAGATGCTACTAAATTTGTTGAAGATTCATTCGACGCTATGA
AACAAGCTGGCGGATTAGAATAG

Upstream 100 bases:

>100_bases
TTAATTAAATTTAATTTTAATGTAAATTAATTTAAAGTGTTGTATTAGTTTTAAAATTTATTCACTGTTCTTTGTAAATT
AAACTTAAGGAGGAATTTTA

Downstream 100 bases:

>100_bases
TTTATTAAAATAAAGCAAAGATGATATTGTTTTATCTTTGCTTTGTTTATAAAGGAGTGACACTAAATGAAGAAAAAAAT
AGATGCTTTAAAAAATAGTG

Product: sugar ABC transporter periplasmic protein

Products: NA

Alternate protein names: Sugar ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MIKLTKIISTIILSTMMVTSLTACSGGKNGAASSGDTISVNFWTAPQKVQYDYWTTKAEEFNKTNTEINGKSIKLVVQQM
PETPSSEAGIQNALATDTAPAISENVNRGFASTLAASDAIYSLESEEWFKDIVKNRALETVMPGWQIGGKQFVLPQYVNP
MVLQWNMKALKELGVEKVPETKTEIESLVVKFRENEAKMSAMGVSHVFYRNSLIRPDQWWDRWSDFQNIYLAFSGGEPWV
EGNKLVLDKNTTKETFEFFGSLGDTLLTSEIPNVWAEENPPVLFTIAAPWEIQALREGGKKYGEDFEYGPMIVKNQGDTS
YNFADSKGLVLYKDNNITDEIHEGAVEFIKWLYNEENSANTDLEWLQATTMLPVRGDLITNDTFKKYFEENPEVKDLAKH
VPNAIPCMANDNMTPIQEALGTQLAKYLETTLSSTDVKAKDATKFVEDSFDAMKQAGGLE

Sequences:

>Translated_460_residues
MIKLTKIISTIILSTMMVTSLTACSGGKNGAASSGDTISVNFWTAPQKVQYDYWTTKAEEFNKTNTEINGKSIKLVVQQM
PETPSSEAGIQNALATDTAPAISENVNRGFASTLAASDAIYSLESEEWFKDIVKNRALETVMPGWQIGGKQFVLPQYVNP
MVLQWNMKALKELGVEKVPETKTEIESLVVKFRENEAKMSAMGVSHVFYRNSLIRPDQWWDRWSDFQNIYLAFSGGEPWV
EGNKLVLDKNTTKETFEFFGSLGDTLLTSEIPNVWAEENPPVLFTIAAPWEIQALREGGKKYGEDFEYGPMIVKNQGDTS
YNFADSKGLVLYKDNNITDEIHEGAVEFIKWLYNEENSANTDLEWLQATTMLPVRGDLITNDTFKKYFEENPEVKDLAKH
VPNAIPCMANDNMTPIQEALGTQLAKYLETTLSSTDVKAKDATKFVEDSFDAMKQAGGLE
>Mature_460_residues
MIKLTKIISTIILSTMMVTSLTACSGGKNGAASSGDTISVNFWTAPQKVQYDYWTTKAEEFNKTNTEINGKSIKLVVQQM
PETPSSEAGIQNALATDTAPAISENVNRGFASTLAASDAIYSLESEEWFKDIVKNRALETVMPGWQIGGKQFVLPQYVNP
MVLQWNMKALKELGVEKVPETKTEIESLVVKFRENEAKMSAMGVSHVFYRNSLIRPDQWWDRWSDFQNIYLAFSGGEPWV
EGNKLVLDKNTTKETFEFFGSLGDTLLTSEIPNVWAEENPPVLFTIAAPWEIQALREGGKKYGEDFEYGPMIVKNQGDTS
YNFADSKGLVLYKDNNITDEIHEGAVEFIKWLYNEENSANTDLEWLQATTMLPVRGDLITNDTFKKYFEENPEVKDLAKH
VPNAIPCMANDNMTPIQEALGTQLAKYLETTLSSTDVKAKDATKFVEDSFDAMKQAGGLE

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51493; Mature: 51493

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLTKIISTIILSTMMVTSLTACSGGKNGAASSGDTISVNFWTAPQKVQYDYWTTKAEE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEHHCCCCHHH
FNKTNTEINGKSIKLVVQQMPETPSSEAGIQNALATDTAPAISENVNRGFASTLAASDAI
HCCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHH
YSLESEEWFKDIVKNRALETVMPGWQIGGKQFVLPQYVNPMVLQWNMKALKELGVEKVPE
HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHCCCEEEEECHHHHHHCCCCCCCC
TKTEIESLVVKFRENEAKMSAMGVSHVFYRNSLIRPDQWWDRWSDFQNIYLAFSGGEPWV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCC
EGNKLVLDKNTTKETFEFFGSLGDTLLTSEIPNVWAEENPPVLFTIAAPWEIQALREGGK
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
KYGEDFEYGPMIVKNQGDTSYNFADSKGLVLYKDNNITDEIHEGAVEFIKWLYNEENSAN
HHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
TDLEWLQATTMLPVRGDLITNDTFKKYFEENPEVKDLAKHVPNAIPCMANDNMTPIQEAL
CCHHHHHHHEECEECCCEECCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHH
GTQLAKYLETTLSSTDVKAKDATKFVEDSFDAMKQAGGLE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIKLTKIISTIILSTMMVTSLTACSGGKNGAASSGDTISVNFWTAPQKVQYDYWTTKAEE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEHHCCCCHHH
FNKTNTEINGKSIKLVVQQMPETPSSEAGIQNALATDTAPAISENVNRGFASTLAASDAI
HCCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHH
YSLESEEWFKDIVKNRALETVMPGWQIGGKQFVLPQYVNPMVLQWNMKALKELGVEKVPE
HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHCCCEEEEECHHHHHHCCCCCCCC
TKTEIESLVVKFRENEAKMSAMGVSHVFYRNSLIRPDQWWDRWSDFQNIYLAFSGGEPWV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCC
EGNKLVLDKNTTKETFEFFGSLGDTLLTSEIPNVWAEENPPVLFTIAAPWEIQALREGGK
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
KYGEDFEYGPMIVKNQGDTSYNFADSKGLVLYKDNNITDEIHEGAVEFIKWLYNEENSAN
HHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
TDLEWLQATTMLPVRGDLITNDTFKKYFEENPEVKDLAKHVPNAIPCMANDNMTPIQEAL
CCHHHHHHHEECEECCCEECCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHH
GTQLAKYLETTLSSTDVKAKDATKFVEDSFDAMKQAGGLE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA