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The map label for this gene is ssb [H]

Identifier: 187935202

GI number: 187935202

Start: 3784681

End: 3785124

Strand: Reverse

Name: ssb [H]

Synonym: CLL_A3586

Alternate gene names: 187935202

Gene position: 3785124-3784681 (Counterclockwise)

Preceding gene: 187934196

Following gene: 187932713

Centisome position: 99.6

GC content: 34.68

Gene sequence:

>444_bases
ATGAACAAAGTAGTTTTAATCGGAAGATTGACGAAAGATCCAGAACTAAGATTTACTCCTGGAGCTGGAACAGCAGTAAC
TACCTTAACATTAGCAGTTGATAAGTATAATTCTAAATCTGGTCAAAAAGAAGCGGACTTTGTACCTGTAGTTGTATGGG
GCAAACAAGCTGAAAGTACTGCGAATTACATGAGTAAGGGTAGCCAAATGGCTATAAGTGGTAGAATTCAAACCAGAAAT
TATGAAGCAAAAGATGGAACAAAGAGATATGTTACAGAAGTAGTTGCTACAGAAGTTCAATTTTTAAGTAAATCAAATGC
TTCAGGAAATGTTGGTACTAATTATGGTAACAACACTGAATATTCATCATCAAATAATCCATTTGATGGTATGAACTTTG
AAGAAGACATAACTCCAGTAGATGATGGAGATATGCCATTCTAA

Upstream 100 bases:

>100_bases
GGTCCTGAATTACCAAAAGAATTAGATAGAGTATTCAGAATTACTGATGGTATAATCAGACATATCATTGTTAAAGAAGA
AGTTTAAGGTGGTGTTTTAA

Downstream 100 bases:

>100_bases
TTTAGGTAAGGAGGGAATAACATGAGCAGAGAAGATAATAGAAGATCTGGCGGAAGAGCTAGAAGATCTAAAAGAAAAGT
TTGTGCTTTTTGTGTAGATA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB 3; Helix-destabilizing protein 3 [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNKVVLIGRLTKDPELRFTPGAGTAVTTLTLAVDKYNSKSGQKEADFVPVVVWGKQAESTANYMSKGSQMAISGRIQTRN
YEAKDGTKRYVTEVVATEVQFLSKSNASGNVGTNYGNNTEYSSSNNPFDGMNFEEDITPVDDGDMPF

Sequences:

>Translated_147_residues
MNKVVLIGRLTKDPELRFTPGAGTAVTTLTLAVDKYNSKSGQKEADFVPVVVWGKQAESTANYMSKGSQMAISGRIQTRN
YEAKDGTKRYVTEVVATEVQFLSKSNASGNVGTNYGNNTEYSSSNNPFDGMNFEEDITPVDDGDMPF
>Mature_147_residues
MNKVVLIGRLTKDPELRFTPGAGTAVTTLTLAVDKYNSKSGQKEADFVPVVVWGKQAESTANYMSKGSQMAISGRIQTRN
YEAKDGTKRYVTEVVATEVQFLSKSNASGNVGTNYGNNTEYSSSNNPFDGMNFEEDITPVDDGDMPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=99, Percent_Identity=40.4040404040404, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16008; Mature: 16008

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVVLIGRLTKDPELRFTPGAGTAVTTLTLAVDKYNSKSGQKEADFVPVVVWGKQAEST
CCCEEEEEECCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCHHH
ANYMSKGSQMAISGRIQTRNYEAKDGTKRYVTEVVATEVQFLSKSNASGNVGTNYGNNTE
HHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
YSSSNNPFDGMNFEEDITPVDDGDMPF
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKVVLIGRLTKDPELRFTPGAGTAVTTLTLAVDKYNSKSGQKEADFVPVVVWGKQAEST
CCCEEEEEECCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCHHH
ANYMSKGSQMAISGRIQTRNYEAKDGTKRYVTEVVATEVQFLSKSNASGNVGTNYGNNTE
HHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
YSSSNNPFDGMNFEEDITPVDDGDMPF
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]