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The map label for this gene is ylxY [H]

Identifier: 187934902

GI number: 187934902

Start: 2591215

End: 2591976

Strand: Reverse

Name: ylxY [H]

Synonym: CLL_A2498

Alternate gene names: 187934902

Gene position: 2591976-2591215 (Counterclockwise)

Preceding gene: 187935672

Following gene: 187935425

Centisome position: 68.2

GC content: 26.12

Gene sequence:

>762_bases
GTGAAATGGAGAAAAACACGGATATTTTTGGATTTAATTTTAATAATTATAGTAATTTTTATGTCAATAGAGCTTAATAA
AAATGTAAATGCTATTTCTGTAAATCTATATGAACATCCTATATATTCTGTTGATATAGAAGAAAAAGCAATTAGTCTAA
CTTTTGATATAAATTGGGCAGAAAAGGATAATCTTCAAAGCATATTACAAATATTAAATAAATACAATGTAAAAGGAACA
TTTTTTATAATGGGGGGATGGGTTGATTATAGTAGTGAAAATGTTGAAAGATTAAAGAAAATTAAAGAAGGGGGGCATGA
AATAGGTAATCATAGTTATAAACATCCTGATTTTGCAAAAATAAGTGAATTAAAAATAGAAGAACAACTTAAAAAGACAG
ATGAAACTATAGAAAATAACATAGGAGAAAAACCTAAACTTTTTAGATTTCCTAGTGGATCATATAATAAACAAGCAATT
CAAAAAGTAAAAAGTTTAGGATATATTCCGATTCAATGGAATGTTGATTCTGTTGATTGGAAAGAAGTAGGACAAGAAAG
TGAATATAATAGAGTTATGAAAGGGGTAGCTCCAGGGGCAATATTACTTTTTCATAATAATGCAAAATATACTCCAAATA
ATTTGGAGAGAATTATAAAAGAGTTGAAAACTCAAGGTTATGAATTTAAAACAGTAGGGAATTTAATATATTCTGATGGA
TATTATATAGACGAAAATGGTATTCAGCACAAAAATAAATAA

Upstream 100 bases:

>100_bases
ATATATATATTATATCATAAAATATGATTTATTGAATATAGTTAATATTAATAATAATTAAGTAGAATGAAAAATTATAA
AATATAAGGAGCGTTTAGGG

Downstream 100 bases:

>100_bases
TAAAGATTGAAAATAAACCAGTATTTGTATTATAATGGTAATAAGTGCTAGTGGGAGTACTGTTTACCAAATTATTAACA
GTAGAGAGAGGGGTAACAAT

Product: chitooligosaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKWRKTRIFLDLILIIIVIFMSIELNKNVNAISVNLYEHPIYSVDIEEKAISLTFDINWAEKDNLQSILQILNKYNVKGT
FFIMGGWVDYSSENVERLKKIKEGGHEIGNHSYKHPDFAKISELKIEEQLKKTDETIENNIGEKPKLFRFPSGSYNKQAI
QKVKSLGYIPIQWNVDSVDWKEVGQESEYNRVMKGVAPGAILLFHNNAKYTPNNLERIIKELKTQGYEFKTVGNLIYSDG
YYIDENGIQHKNK

Sequences:

>Translated_253_residues
MKWRKTRIFLDLILIIIVIFMSIELNKNVNAISVNLYEHPIYSVDIEEKAISLTFDINWAEKDNLQSILQILNKYNVKGT
FFIMGGWVDYSSENVERLKKIKEGGHEIGNHSYKHPDFAKISELKIEEQLKKTDETIENNIGEKPKLFRFPSGSYNKQAI
QKVKSLGYIPIQWNVDSVDWKEVGQESEYNRVMKGVAPGAILLFHNNAKYTPNNLERIIKELKTQGYEFKTVGNLIYSDG
YYIDENGIQHKNK
>Mature_253_residues
MKWRKTRIFLDLILIIIVIFMSIELNKNVNAISVNLYEHPIYSVDIEEKAISLTFDINWAEKDNLQSILQILNKYNVKGT
FFIMGGWVDYSSENVERLKKIKEGGHEIGNHSYKHPDFAKISELKIEEQLKKTDETIENNIGEKPKLFRFPSGSYNKQAI
QKVKSLGYIPIQWNVDSVDWKEVGQESEYNRVMKGVAPGAILLFHNNAKYTPNNLERIIKELKTQGYEFKTVGNLIYSDG
YYIDENGIQHKNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 29395; Mature: 29395

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWRKTRIFLDLILIIIVIFMSIELNKNVNAISVNLYEHPIYSVDIEEKAISLTFDINWA
CCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCEEEEEECCCEEEEEEEECCC
EKDNLQSILQILNKYNVKGTFFIMGGWVDYSSENVERLKKIKEGGHEIGNHSYKHPDFAK
CCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHH
ISELKIEEQLKKTDETIENNIGEKPKLFRFPSGSYNKQAIQKVKSLGYIPIQWNVDSVDW
HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCH
KEVGQESEYNRVMKGVAPGAILLFHNNAKYTPNNLERIIKELKTQGYEFKTVGNLIYSDG
HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEHHHEEECCC
YYIDENGIQHKNK
EEECCCCCCCCCC
>Mature Secondary Structure
MKWRKTRIFLDLILIIIVIFMSIELNKNVNAISVNLYEHPIYSVDIEEKAISLTFDINWA
CCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCEEEEEECCCEEEEEEEECCC
EKDNLQSILQILNKYNVKGTFFIMGGWVDYSSENVERLKKIKEGGHEIGNHSYKHPDFAK
CCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHH
ISELKIEEQLKKTDETIENNIGEKPKLFRFPSGSYNKQAIQKVKSLGYIPIQWNVDSVDW
HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCH
KEVGQESEYNRVMKGVAPGAILLFHNNAKYTPNNLERIIKELKTQGYEFKTVGNLIYSDG
HHHCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEHHHEEECCC
YYIDENGIQHKNK
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]