Click here to switch to the map view.

The map label for this gene is agaS [H]

Identifier: 187934791

GI number: 187934791

Start: 3239198

End: 3240361

Strand: Reverse

Name: agaS [H]

Synonym: CLL_A3129

Alternate gene names: 187934791

Gene position: 3240361-3239198 (Counterclockwise)

Preceding gene: 187933736

Following gene: 187935508

Centisome position: 85.27

GC content: 26.46

Gene sequence:

>1164_bases
ATGATTTTTGGAAAAACTATTGAAGAGTTAGAAAAATTAAAAGCAATAAACACATCAAAAGAAATAATGCAACAACCTGA
TTTATGGAAAGAGACATATAGGATAATTTATGATAAAAGAGATGAAATTAAATTATTTTTAAAGAAAAATATATCAAAGA
ACACAAGAATAATATTAACAGGTGCTGGAACTTCAGATTATGTAGGACAAACAGCTTTATTAGAACTTAGGAGTAAAATA
AATGCACGAATTGAAGCTATAGCGACTACTGATTTAGTATCAAATCCTAAGGAATATATAGAAAAGGATACTCAAACTAT
TTTAATATCATATGCAAGATCAGGAAATTCTCCTGAAAGTGTAGCAGCCTATGATTTATGTGAAAAGTTCATTAAAAATA
TATCACAAGTGGTAATTACCTGTAATGAAAATGGTGAATTAGGTAAAAAAACTATTAAAAATAATAAGAATTTGGTTTTA
TTTATGCCAAAAGAATCAAATGATAAAGGATTTGCTATGACAAGTTCTTTTAGTTGTATGCTTCTAGCAACAATATTAAT
GTTTGATATAGATAATCTAGAAAATAATAAAACTTTTGTAGATTTAGTGTCAGAGCAAGGAGAAGACATTTTAGAAAATA
ACTGGAATGATATTTGTGATTTAGTTAATTATGAATGTAATAGAGTTGTTTATTTAGGATCAGGAATACTAAAAGCTTTG
TCTCAGGAAATGGCATTAAAAAGCTTAGAACTCACAAGTGGAAAGATAGTAACAATATTTGAATCTGTTATGGGCTTTAG
ACATGGTCCTAAGTCAATAATTGATGATAATACTTTAATTATCATTATGAATTCTATAGACAAATATACTAATCTTTATG
ATTTAGATTTAATAAATGAGATATATAATGATTCGGGGAATCATAAACTGGCAGTAATAAGCTATAAAAAGAATGAAAAA
TTAAAAAGTATATGCGATAAATGCATTGAAATAAATGGAGCAAATGTACCAGAAATTTATACAGTATTTAATTATATTTT
ATTTGGACAAATGTTTGGGTTATTTAACTCAATAAAACTAAAAATATCTCCAGACAATCCAAGACCAGATGGTACTGTTA
ATAGGGTTGTTAAAGGGGTACACATTCATAAACAAAACTTTTAG

Upstream 100 bases:

>100_bases
ATTGCAAGAGGAGATAAATTTAAATATAGAGTATGTCTAAAAAATTAGTAAAAATTCACATGTACTGGTAATTACAATAT
AGCCAGTAAGGGAGGGTATT

Downstream 100 bases:

>100_bases
TTTTTAAGATTTTAATTTGTGTGATTGTTGAATATATAAACATTTTTTTTAAAATATATACGAATTTTAAATATATAAAT
TAGATAAATATGATAATGAG

Product: AgaS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MIFGKTIEELEKLKAINTSKEIMQQPDLWKETYRIIYDKRDEIKLFLKKNISKNTRIILTGAGTSDYVGQTALLELRSKI
NARIEAIATTDLVSNPKEYIEKDTQTILISYARSGNSPESVAAYDLCEKFIKNISQVVITCNENGELGKKTIKNNKNLVL
FMPKESNDKGFAMTSSFSCMLLATILMFDIDNLENNKTFVDLVSEQGEDILENNWNDICDLVNYECNRVVYLGSGILKAL
SQEMALKSLELTSGKIVTIFESVMGFRHGPKSIIDDNTLIIIMNSIDKYTNLYDLDLINEIYNDSGNHKLAVISYKKNEK
LKSICDKCIEINGANVPEIYTVFNYILFGQMFGLFNSIKLKISPDNPRPDGTVNRVVKGVHIHKQNF

Sequences:

>Translated_387_residues
MIFGKTIEELEKLKAINTSKEIMQQPDLWKETYRIIYDKRDEIKLFLKKNISKNTRIILTGAGTSDYVGQTALLELRSKI
NARIEAIATTDLVSNPKEYIEKDTQTILISYARSGNSPESVAAYDLCEKFIKNISQVVITCNENGELGKKTIKNNKNLVL
FMPKESNDKGFAMTSSFSCMLLATILMFDIDNLENNKTFVDLVSEQGEDILENNWNDICDLVNYECNRVVYLGSGILKAL
SQEMALKSLELTSGKIVTIFESVMGFRHGPKSIIDDNTLIIIMNSIDKYTNLYDLDLINEIYNDSGNHKLAVISYKKNEK
LKSICDKCIEINGANVPEIYTVFNYILFGQMFGLFNSIKLKISPDNPRPDGTVNRVVKGVHIHKQNF
>Mature_387_residues
MIFGKTIEELEKLKAINTSKEIMQQPDLWKETYRIIYDKRDEIKLFLKKNISKNTRIILTGAGTSDYVGQTALLELRSKI
NARIEAIATTDLVSNPKEYIEKDTQTILISYARSGNSPESVAAYDLCEKFIKNISQVVITCNENGELGKKTIKNNKNLVL
FMPKESNDKGFAMTSSFSCMLLATILMFDIDNLENNKTFVDLVSEQGEDILENNWNDICDLVNYECNRVVYLGSGILKAL
SQEMALKSLELTSGKIVTIFESVMGFRHGPKSIIDDNTLIIIMNSIDKYTNLYDLDLINEIYNDSGNHKLAVISYKKNEK
LKSICDKCIEINGANVPEIYTVFNYILFGQMFGLFNSIKLKISPDNPRPDGTVNRVVKGVHIHKQNF

Specific function: May be a tagatose-6-phosphate ketose/aldose isomerase [H]

COG id: COG2222

COG function: function code M; Predicted phosphosugar isomerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 SIS domains [H]

Homologues:

Organism=Escherichia coli, GI1789525, Length=369, Percent_Identity=38.4823848238482, Blast_Score=261, Evalue=4e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001347
- InterPro:   IPR014180 [H]

Pfam domain/function: PF01380 SIS [H]

EC number: 5.-.-.- [C]

Molecular weight: Translated: 43855; Mature: 43855

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFGKTIEELEKLKAINTSKEIMQQPDLWKETYRIIYDKRDEIKLFLKKNISKNTRIILT
CCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE
GAGTSDYVGQTALLELRSKINARIEAIATTDLVSNPKEYIEKDTQTILISYARSGNSPES
ECCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCHHHHHCCCCEEEEEEECCCCCCHH
VAAYDLCEKFIKNISQVVITCNENGELGKKTIKNNKNLVLFMPKESNDKGFAMTSSFSCM
HHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHCCCCCEEEEEECCCCCCCEEEECCCHHH
LLATILMFDIDNLENNKTFVDLVSEQGEDILENNWNDICDLVNYECNRVVYLGSGILKAL
HHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCEEEEECCHHHHHH
SQEMALKSLELTSGKIVTIFESVMGFRHGPKSIIDDNTLIIIMNSIDKYTNLYDLDLINE
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCHHHCCCHHHHHHHH
IYNDSGNHKLAVISYKKNEKLKSICDKCIEINGANVPEIYTVFNYILFGQMFGLFNSIKL
HHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEE
KISPDNPRPDGTVNRVVKGVHIHKQNF
EECCCCCCCCCHHHHHHHHHEEECCCC
>Mature Secondary Structure
MIFGKTIEELEKLKAINTSKEIMQQPDLWKETYRIIYDKRDEIKLFLKKNISKNTRIILT
CCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE
GAGTSDYVGQTALLELRSKINARIEAIATTDLVSNPKEYIEKDTQTILISYARSGNSPES
ECCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCHHHHHCCCCEEEEEEECCCCCCHH
VAAYDLCEKFIKNISQVVITCNENGELGKKTIKNNKNLVLFMPKESNDKGFAMTSSFSCM
HHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHCCCCCEEEEEECCCCCCCEEEECCCHHH
LLATILMFDIDNLENNKTFVDLVSEQGEDILENNWNDICDLVNYECNRVVYLGSGILKAL
HHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCEEEEECCHHHHHH
SQEMALKSLELTSGKIVTIFESVMGFRHGPKSIIDDNTLIIIMNSIDKYTNLYDLDLINE
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCHHHCCCHHHHHHHH
IYNDSGNHKLAVISYKKNEKLKSICDKCIEINGANVPEIYTVFNYILFGQMFGLFNSIKL
HHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEE
KISPDNPRPDGTVNRVVKGVHIHKQNF
EECCCCCCCCCHHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]