Click here to switch to the map view.

The map label for this gene is 187934704

Identifier: 187934704

GI number: 187934704

Start: 2000863

End: 2001942

Strand: Reverse

Name: 187934704

Synonym: CLL_A1908

Alternate gene names: NA

Gene position: 2001942-2000863 (Counterclockwise)

Preceding gene: 187934368

Following gene: 187933698

Centisome position: 52.68

GC content: 28.89

Gene sequence:

>1080_bases
ATGGCAACAAGTAATACTATGCATGGTACTAAATTTACAGTACAGGCATTAGCAGAGACAGCCAATATTAGAGCAAAGCA
TGGAGTGCTTTTTCTAATTCTAGATGATCCAACTGTAACTCCAGGAGTATATCAATATTCCAAATTAAAAAAAGTTGTTG
AAAAATATGAAGAAAAGAATAAATCTCTTATAAGTACAATTTTCGCTGATTATGGAGTTAAAACATTAATAGTATCTGTT
GGACACGCTGAAAGCGGATTAACTGGTTCTCTAGATAAATCATTATCATTACTTAATAAAGTAAATGAAAATGGATGGTT
GGCAGTACCACAAATTAAAACAGATGAGGATAAAAAGAAGGTAGCAGATTTTGTTAAATCTCAAAGAAAAGAAGAAGACT
ATCAAATAAAAGCTGTACTCTACAATTATAAAAGTAATTTTGAAGGGATAGTAAATTTTACTGGAAAAGACTTAGGGGAT
ATTTCTCCAGAAGAATATACAATACAAACAGCAGCTACATTATGTACTTTGGGCGCAAATGAAGCTGTTACAAACCACAT
TGCAAAGAATGTAAAAAGTTGTGATGTGAAAGTAGATAACAATGAGTGTGTATCTAATGGGGAATTATTTTTATATAACA
ATGGTACTAACATTGTTTACTCAAGAGGTGTAAATTCACTTGAAGTTATTGAAAATTTACAATCAGAATCGCTATCTAAA
ATAAGAATTGTTGAAACTATGGATCTTGTGAAATCAGATTCTAATAAAATATTTGAATCACACTATTTAGGCAAAATAGG
AAACTCATATAAAAATAGAAAAACATTGATAAATGAGCTGAACTCTTATTTAAGAACTTTAAGTAATGAAGGTTACTTAA
GTAATGATGAAGAATCTTTTGCTGAATTAGATGCCGAAGCTACTAGAAAATATTTAGAAAGTAAAGGCATTAATACTGAT
GAAATGAAAGATGAAGAAGTTTTAAAAGCTAAAACAGGAAGTTATGTATTTATAAAAATTACATTAAAAATTATGGATTG
TATTGAAGACATTCATATTTGCCTACAATATGAAACTTAG

Upstream 100 bases:

>100_bases
ATGATAAGCTTATGGGAATTTTAAAATTAAATATTATTGATTAAAGACTAGTTATAACTGGTCTTATTTTTATGCATAAA
ATTAGAAAGGAGAGATGTAT

Downstream 100 bases:

>100_bases
AAAGGAGTGGATTAAATGAGCCAATTAAATCCTTATGATGTTGTTAGAACCAACAAAGGGTATATGAAAATAAATGGTAT
AGAGCTTGCTGAATTAAAAG

Product: XkdK protein

Products: NA

Alternate protein names: XkdK Protein; Phage-Like Element PBSX Protein XkdK

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MATSNTMHGTKFTVQALAETANIRAKHGVLFLILDDPTVTPGVYQYSKLKKVVEKYEEKNKSLISTIFADYGVKTLIVSV
GHAESGLTGSLDKSLSLLNKVNENGWLAVPQIKTDEDKKKVADFVKSQRKEEDYQIKAVLYNYKSNFEGIVNFTGKDLGD
ISPEEYTIQTAATLCTLGANEAVTNHIAKNVKSCDVKVDNNECVSNGELFLYNNGTNIVYSRGVNSLEVIENLQSESLSK
IRIVETMDLVKSDSNKIFESHYLGKIGNSYKNRKTLINELNSYLRTLSNEGYLSNDEESFAELDAEATRKYLESKGINTD
EMKDEEVLKAKTGSYVFIKITLKIMDCIEDIHICLQYET

Sequences:

>Translated_359_residues
MATSNTMHGTKFTVQALAETANIRAKHGVLFLILDDPTVTPGVYQYSKLKKVVEKYEEKNKSLISTIFADYGVKTLIVSV
GHAESGLTGSLDKSLSLLNKVNENGWLAVPQIKTDEDKKKVADFVKSQRKEEDYQIKAVLYNYKSNFEGIVNFTGKDLGD
ISPEEYTIQTAATLCTLGANEAVTNHIAKNVKSCDVKVDNNECVSNGELFLYNNGTNIVYSRGVNSLEVIENLQSESLSK
IRIVETMDLVKSDSNKIFESHYLGKIGNSYKNRKTLINELNSYLRTLSNEGYLSNDEESFAELDAEATRKYLESKGINTD
EMKDEEVLKAKTGSYVFIKITLKIMDCIEDIHICLQYET
>Mature_358_residues
ATSNTMHGTKFTVQALAETANIRAKHGVLFLILDDPTVTPGVYQYSKLKKVVEKYEEKNKSLISTIFADYGVKTLIVSVG
HAESGLTGSLDKSLSLLNKVNENGWLAVPQIKTDEDKKKVADFVKSQRKEEDYQIKAVLYNYKSNFEGIVNFTGKDLGDI
SPEEYTIQTAATLCTLGANEAVTNHIAKNVKSCDVKVDNNECVSNGELFLYNNGTNIVYSRGVNSLEVIENLQSESLSKI
RIVETMDLVKSDSNKIFESHYLGKIGNSYKNRKTLINELNSYLRTLSNEGYLSNDEESFAELDAEATRKYLESKGINTDE
MKDEEVLKAKTGSYVFIKITLKIMDCIEDIHICLQYET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40193; Mature: 40062

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSNTMHGTKFTVQALAETANIRAKHGVLFLILDDPTVTPGVYQYSKLKKVVEKYEEKN
CCCCCCCCCCHHHHHHHHHHHCCEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
KSLISTIFADYGVKTLIVSVGHAESGLTGSLDKSLSLLNKVNENGWLAVPQIKTDEDKKK
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHH
VADFVKSQRKEEDYQIKAVLYNYKSNFEGIVNFTGKDLGDISPEEYTIQTAATLCTLGAN
HHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHCCCH
EAVTNHIAKNVKSCDVKVDNNECVSNGELFLYNNGTNIVYSRGVNSLEVIENLQSESLSK
HHHHHHHHHCHHHCEEEECCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHH
IRIVETMDLVKSDSNKIFESHYLGKIGNSYKNRKTLINELNSYLRTLSNEGYLSNDEESF
EEHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
AELDAEATRKYLESKGINTDEMKDEEVLKAKTGSYVFIKITLKIMDCIEDIHICLQYET
HHHCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHEEEEECC
>Mature Secondary Structure 
ATSNTMHGTKFTVQALAETANIRAKHGVLFLILDDPTVTPGVYQYSKLKKVVEKYEEKN
CCCCCCCCCHHHHHHHHHHHCCEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
KSLISTIFADYGVKTLIVSVGHAESGLTGSLDKSLSLLNKVNENGWLAVPQIKTDEDKKK
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHH
VADFVKSQRKEEDYQIKAVLYNYKSNFEGIVNFTGKDLGDISPEEYTIQTAATLCTLGAN
HHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHCCCH
EAVTNHIAKNVKSCDVKVDNNECVSNGELFLYNNGTNIVYSRGVNSLEVIENLQSESLSK
HHHHHHHHHCHHHCEEEECCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHH
IRIVETMDLVKSDSNKIFESHYLGKIGNSYKNRKTLINELNSYLRTLSNEGYLSNDEESF
EEHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
AELDAEATRKYLESKGINTDEMKDEEVLKAKTGSYVFIKITLKIMDCIEDIHICLQYET
HHHCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA