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The map label for this gene is yybT [H]

Identifier: 187934597

GI number: 187934597

Start: 3781935

End: 3783875

Strand: Reverse

Name: yybT [H]

Synonym: CLL_A3583

Alternate gene names: 187934597

Gene position: 3783875-3781935 (Counterclockwise)

Preceding gene: 187934033

Following gene: 187934927

Centisome position: 99.57

GC content: 28.08

Gene sequence:

>1941_bases
ATGAATAAAGTAACAACTATTAGGAGGTTACTTAAGCCGATTATATTAATTTTACTTTCATTAATTTTATATTATTTTAA
TTATTCAGGAATAGCATTGGTAATTTTTTTGGTTTATTTAGTGGATAATTTTTATCAGCTAAATTATTATTGGAAAAAAG
ACAATAATATTGATGAATTTATAGAAAAACTTAATAATGGTATAGAAAGTAATATATTTCAGTTTGTGCATCCCCTAGCT
TTAATTCAAAGAAATGGTGATATTGTATGGAGCAATTCTATATTTACTGAATTGAAATCTAATGAAGAATCATCGAATAA
AAATATTTTAAGTATAGCTAGGGGTATAAATTTAGGTCGTATATTAAGCGATAAGGAAACCTTACATCAAAGATTAAAAA
TAAAAGGTAAATTATATGATACTTATGCAACTAAAATTAATGTAGAAGATAATGTAGAATTATATTTAGTGTACTTTAAT
GATGTAACCGAAATAATAGGTTATGAAACCACAAAAGAAAGTGTTATGTTAATCGAAGTTGATAATTTTACAGAGGCGCT
AGAAACAACTGAAGAAAGTAATAGACCGTTACTAGCTGCAGAAATAGAAAGAACAATAAACGCATACGCAAATAATTTAA
AAGCAATGATAAAAAAATATGATACCAATAAATACGTTCTATCTATTCAAGATAATTTTATAAAAAAACAGATTGATGAG
AAATTTAAAATATTAGATGAGATTTCAAAAATAGACAAGGGAAATAAGATTGAAGTTACGTTAAGTATCGGTATTGGTAG
AGGGGGAATATCTCCAGCAGAAAATGCTAAGTACGCCAATACAGCAAAGGAACTAGCATTAGGTAGAGGCGGAGACCAAA
CTGTTGTTAAAAGTAATGATGAAATAAAATTCTTTGGTGGAAATACTAAAGAAATAGAGAAAAGAACAAGAGTTAGAGCT
AGAGTTGTAGCACATGCTTTAAATGAATTAATATTTGTAAGTAGCAACGTTTATATTATAGGACATAAGAATCCTGATAT
GGATTGTTTTGGAGCAGCTATGGGATTAGCAAGCGTTATTAAGCAGTTAGGTAAATCTTGTAAAATTGTATTGCAGAATG
ATACAAATGCAATAGAATATTATTTGGATAATTTGATGAAAGATTCTAAATATGATGATTTATTTATATCAACAGAAAAA
GCAAAAAATGATTTAGATGATGATTCATTGTTTATAATAGTAGATGTTCACAATAAAAGTTATGTATCTGATTTAGAACT
AGTTATGAAGGCTAAGAGAAAAGTAATCATAGATCATCATAGGAGAAGTCCTGATATGATTGAGGGTGATATATTAAATT
ATATAGAAGTATATGCATCATCAACTTCAGAGATGGTTACTGAAATAATTCAATATATGGTTGAAAAGCCAAAGCTAGCT
CGAACTGAAGCAGAGGGATTACTTGCAGGAATTTTTATGGATACTAAAGGTTTCTTATTTAAGACTGGAGTAAGAACATT
TGAAGCAGCATCATTTTTAAGAAAATCAGGAGCAGATACTATAGAAATTAAAAAAATATTTAGTGATGACTTAGAAAACT
ATTTACTTATTGCAGAAACAATAAAATCTGCTGAAGTAAATGACAATATAGCTATTGCAATATGTCCTAAAAATGTGGAT
ACTGTAATTGTAGCCAAAGCTGCTGATGAGCTATTAAATATATCAGGTATAAATGTATCTTTTGTTTTAGCACAAATAAA
TAATGATATATATATAAGTGGAAGATCAGCTGGGGATATAAATGTTCAAATAGTTCTAGAAACCCTAGGAGGCGGAGGAC
ATATGAACATTGCAGGTGCAAAAATATCAGACGCTAAAATTGAAGATGTGGTTTATGACTTAAAAGAAGCAATAAAAAAA
TATTTAAAGGTGGGAGAATAA

Upstream 100 bases:

>100_bases
GAGCTGAGGATGAAGTTGAAAAAGATGGTAAAAGTTTAAGTAAGCTTAAGACCTATATAAATAATAGAAGAGATTAATAA
TAAATTTAGGAGGCTTTTTT

Downstream 100 bases:

>100_bases
TTATGAAAGTTATTTTATTACAAGATGTTAAGAAGATAGGTAAAAAGGGTGAAGTTATAGAAGCTTCAGATGGTTATGCA
AGAAACTTTTTATTTCCTAG

Product: DHH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MNKVTTIRRLLKPIILILLSLILYYFNYSGIALVIFLVYLVDNFYQLNYYWKKDNNIDEFIEKLNNGIESNIFQFVHPLA
LIQRNGDIVWSNSIFTELKSNEESSNKNILSIARGINLGRILSDKETLHQRLKIKGKLYDTYATKINVEDNVELYLVYFN
DVTEIIGYETTKESVMLIEVDNFTEALETTEESNRPLLAAEIERTINAYANNLKAMIKKYDTNKYVLSIQDNFIKKQIDE
KFKILDEISKIDKGNKIEVTLSIGIGRGGISPAENAKYANTAKELALGRGGDQTVVKSNDEIKFFGGNTKEIEKRTRVRA
RVVAHALNELIFVSSNVYIIGHKNPDMDCFGAAMGLASVIKQLGKSCKIVLQNDTNAIEYYLDNLMKDSKYDDLFISTEK
AKNDLDDDSLFIIVDVHNKSYVSDLELVMKAKRKVIIDHHRRSPDMIEGDILNYIEVYASSTSEMVTEIIQYMVEKPKLA
RTEAEGLLAGIFMDTKGFLFKTGVRTFEAASFLRKSGADTIEIKKIFSDDLENYLLIAETIKSAEVNDNIAIAICPKNVD
TVIVAKAADELLNISGINVSFVLAQINNDIYISGRSAGDINVQIVLETLGGGGHMNIAGAKISDAKIEDVVYDLKEAIKK
YLKVGE

Sequences:

>Translated_646_residues
MNKVTTIRRLLKPIILILLSLILYYFNYSGIALVIFLVYLVDNFYQLNYYWKKDNNIDEFIEKLNNGIESNIFQFVHPLA
LIQRNGDIVWSNSIFTELKSNEESSNKNILSIARGINLGRILSDKETLHQRLKIKGKLYDTYATKINVEDNVELYLVYFN
DVTEIIGYETTKESVMLIEVDNFTEALETTEESNRPLLAAEIERTINAYANNLKAMIKKYDTNKYVLSIQDNFIKKQIDE
KFKILDEISKIDKGNKIEVTLSIGIGRGGISPAENAKYANTAKELALGRGGDQTVVKSNDEIKFFGGNTKEIEKRTRVRA
RVVAHALNELIFVSSNVYIIGHKNPDMDCFGAAMGLASVIKQLGKSCKIVLQNDTNAIEYYLDNLMKDSKYDDLFISTEK
AKNDLDDDSLFIIVDVHNKSYVSDLELVMKAKRKVIIDHHRRSPDMIEGDILNYIEVYASSTSEMVTEIIQYMVEKPKLA
RTEAEGLLAGIFMDTKGFLFKTGVRTFEAASFLRKSGADTIEIKKIFSDDLENYLLIAETIKSAEVNDNIAIAICPKNVD
TVIVAKAADELLNISGINVSFVLAQINNDIYISGRSAGDINVQIVLETLGGGGHMNIAGAKISDAKIEDVVYDLKEAIKK
YLKVGE
>Mature_646_residues
MNKVTTIRRLLKPIILILLSLILYYFNYSGIALVIFLVYLVDNFYQLNYYWKKDNNIDEFIEKLNNGIESNIFQFVHPLA
LIQRNGDIVWSNSIFTELKSNEESSNKNILSIARGINLGRILSDKETLHQRLKIKGKLYDTYATKINVEDNVELYLVYFN
DVTEIIGYETTKESVMLIEVDNFTEALETTEESNRPLLAAEIERTINAYANNLKAMIKKYDTNKYVLSIQDNFIKKQIDE
KFKILDEISKIDKGNKIEVTLSIGIGRGGISPAENAKYANTAKELALGRGGDQTVVKSNDEIKFFGGNTKEIEKRTRVRA
RVVAHALNELIFVSSNVYIIGHKNPDMDCFGAAMGLASVIKQLGKSCKIVLQNDTNAIEYYLDNLMKDSKYDDLFISTEK
AKNDLDDDSLFIIVDVHNKSYVSDLELVMKAKRKVIIDHHRRSPDMIEGDILNYIEVYASSTSEMVTEIIQYMVEKPKLA
RTEAEGLLAGIFMDTKGFLFKTGVRTFEAASFLRKSGADTIEIKKIFSDDLENYLLIAETIKSAEVNDNIAIAICPKNVD
TVIVAKAADELLNISGINVSFVLAQINNDIYISGRSAGDINVQIVLETLGGGGHMNIAGAKISDAKIEDVVYDLKEAIKK
YLKVGE

Specific function: Unknown

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR014528 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 72718; Mature: 72718

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVTTIRRLLKPIILILLSLILYYFNYSGIALVIFLVYLVDNFYQLNYYWKKDNNIDEF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHH
IEKLNNGIESNIFQFVHPLALIQRNGDIVWSNSIFTELKSNEESSNKNILSIARGINLGR
HHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHCCCCCCCCCHHHHHHCCCHHH
ILSDKETLHQRLKIKGKLYDTYATKINVEDNVELYLVYFNDVTEIIGYETTKESVMLIEV
HCCCHHHHHHHHHHCCEEEEEEEEEEECCCCCEEEEEEECCHHHHHCCCCCCCCEEEEEE
DNFTEALETTEESNRPLLAAEIERTINAYANNLKAMIKKYDTNKYVLSIQDNFIKKQIDE
CCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHH
KFKILDEISKIDKGNKIEVTLSIGIGRGGISPAENAKYANTAKELALGRGGDQTVVKSND
HHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCC
EIKFFGGNTKEIEKRTRVRARVVAHALNELIFVSSNVYIIGHKNPDMDCFGAAMGLASVI
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEECCCCCCHHHHHHHHHHHHH
KQLGKSCKIVLQNDTNAIEYYLDNLMKDSKYDDLFISTEKAKNDLDDDSLFIIVDVHNKS
HHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECHHHCCCCCCCCEEEEEEECCCC
YVSDLELVMKAKRKVIIDHHRRSPDMIEGDILNYIEVYASSTSEMVTEIIQYMVEKPKLA
HHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHH
RTEAEGLLAGIFMDTKGFLFKTGVRTFEAASFLRKSGADTIEIKKIFSDDLENYLLIAET
HHHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHCHHHEEEHHHH
IKSAEVNDNIAIAICPKNVDTVIVAKAADELLNISGINVSFVLAQINNDIYISGRSAGDI
HHCCCCCCCEEEEECCCCCCEEEEEECHHHHHCCCCCCEEEEEEEECCEEEEECCCCCCE
NVQIVLETLGGGGHMNIAGAKISDAKIEDVVYDLKEAIKKYLKVGE
EEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKVTTIRRLLKPIILILLSLILYYFNYSGIALVIFLVYLVDNFYQLNYYWKKDNNIDEF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHH
IEKLNNGIESNIFQFVHPLALIQRNGDIVWSNSIFTELKSNEESSNKNILSIARGINLGR
HHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHCCCCCCCCCHHHHHHCCCHHH
ILSDKETLHQRLKIKGKLYDTYATKINVEDNVELYLVYFNDVTEIIGYETTKESVMLIEV
HCCCHHHHHHHHHHCCEEEEEEEEEEECCCCCEEEEEEECCHHHHHCCCCCCCCEEEEEE
DNFTEALETTEESNRPLLAAEIERTINAYANNLKAMIKKYDTNKYVLSIQDNFIKKQIDE
CCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHH
KFKILDEISKIDKGNKIEVTLSIGIGRGGISPAENAKYANTAKELALGRGGDQTVVKSND
HHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCC
EIKFFGGNTKEIEKRTRVRARVVAHALNELIFVSSNVYIIGHKNPDMDCFGAAMGLASVI
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEECCCCCCHHHHHHHHHHHHH
KQLGKSCKIVLQNDTNAIEYYLDNLMKDSKYDDLFISTEKAKNDLDDDSLFIIVDVHNKS
HHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECHHHCCCCCCCCEEEEEEECCCC
YVSDLELVMKAKRKVIIDHHRRSPDMIEGDILNYIEVYASSTSEMVTEIIQYMVEKPKLA
HHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHH
RTEAEGLLAGIFMDTKGFLFKTGVRTFEAASFLRKSGADTIEIKKIFSDDLENYLLIAET
HHHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHCHHHEEEHHHH
IKSAEVNDNIAIAICPKNVDTVIVAKAADELLNISGINVSFVLAQINNDIYISGRSAGDI
HHCCCCCCCEEEEECCCCCCEEEEEECHHHHHCCCCCCEEEEEEEECCEEEEECCCCCCE
NVQIVLETLGGGGHMNIAGAKISDAKIEDVVYDLKEAIKKYLKVGE
EEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]