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The map label for this gene is ssb [H]

Identifier: 187934592

GI number: 187934592

Start: 2861498

End: 2861920

Strand: Reverse

Name: ssb [H]

Synonym: CLL_A2769

Alternate gene names: 187934592

Gene position: 2861920-2861498 (Counterclockwise)

Preceding gene: 187935590

Following gene: 187933347

Centisome position: 75.31

GC content: 34.52

Gene sequence:

>423_bases
ATGAATAAAGCAGTTCTTATCGGAAGATTGACAAAGGATCCAGAACTAAGATTTACTCCTGGAGCTGGAACAGCAGTAAC
AACCTTAACATTAGCAGTTGATAAATATAATTCTAAGTCTGGTCAAAAAGAAGCGGACTTTGTACCTGTAGTTGTATGGG
GTAAACAAGCTGAAAGCACAGCAAATTACATGACTAAGGGTAGTCAGATGGCTATAAGCGGTAGAATTCAAACAAGAAAT
TATGAAGCTAAAGATGGAACAAAAAGATATGTAACAGAAGTAGTTGCTACAGAAGTTCAATTCTTAAGTAAAGGAGCTAA
TAACCAAGATAATGGTAGTAATAATTTTGGGAATATAAATCAAGATTACGGAAATTTTGAAGATGACATAACTCCGGTAG
ATGATTCGGATATGCCATTTTAA

Upstream 100 bases:

>100_bases
CTATTAAAAACATTAAAACAATATAAAGGTCTATTTGCTAGAGAAGATATTGTAAGAGCTAGTATGGGCGGAAAATTAAT
AATATTGGAGGAATACAAAA

Downstream 100 bases:

>100_bases
TATTACGTACTTGTCAGATATGACGAAGAAAAAATAAAATAAAGTGAGGTAGAGAATTATGAATATAGATATAAATGCAA
TTGTAAACAATAAGTTAAAG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNKAVLIGRLTKDPELRFTPGAGTAVTTLTLAVDKYNSKSGQKEADFVPVVVWGKQAESTANYMTKGSQMAISGRIQTRN
YEAKDGTKRYVTEVVATEVQFLSKGANNQDNGSNNFGNINQDYGNFEDDITPVDDSDMPF

Sequences:

>Translated_140_residues
MNKAVLIGRLTKDPELRFTPGAGTAVTTLTLAVDKYNSKSGQKEADFVPVVVWGKQAESTANYMTKGSQMAISGRIQTRN
YEAKDGTKRYVTEVVATEVQFLSKGANNQDNGSNNFGNINQDYGNFEDDITPVDDSDMPF
>Mature_140_residues
MNKAVLIGRLTKDPELRFTPGAGTAVTTLTLAVDKYNSKSGQKEADFVPVVVWGKQAESTANYMTKGSQMAISGRIQTRN
YEAKDGTKRYVTEVVATEVQFLSKGANNQDNGSNNFGNINQDYGNFEDDITPVDDSDMPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=99, Percent_Identity=39.3939393939394, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 15324; Mature: 15324

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKAVLIGRLTKDPELRFTPGAGTAVTTLTLAVDKYNSKSGQKEADFVPVVVWGKQAEST
CCCEEEEEECCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCH
ANYMTKGSQMAISGRIQTRNYEAKDGTKRYVTEVVATEVQFLSKGANNQDNGSNNFGNIN
HHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
QDYGNFEDDITPVDDSDMPF
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKAVLIGRLTKDPELRFTPGAGTAVTTLTLAVDKYNSKSGQKEADFVPVVVWGKQAEST
CCCEEEEEECCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCH
ANYMTKGSQMAISGRIQTRNYEAKDGTKRYVTEVVATEVQFLSKGANNQDNGSNNFGNIN
HHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
QDYGNFEDDITPVDDSDMPF
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12552129 [H]