| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934481
Identifier: 187934481
GI number: 187934481
Start: 2011988
End: 2012668
Strand: Reverse
Name: 187934481
Synonym: CLL_A1925
Alternate gene names: NA
Gene position: 2012668-2011988 (Counterclockwise)
Preceding gene: 187935774
Following gene: 187933389
Centisome position: 52.96
GC content: 26.87
Gene sequence:
>681_bases ATGAAGTGTGATAGAAATAAACTTAAAGATATACTTAAGGTTAATTTAAATACTTTAAAGCAGATAGAAAGAAGAAATAA TCTACAAATAAGATTAAGAAAAGTTGGTTATGATCTCGTAGATAAGCACAAAGAAAAGAATAAGTATATTTATGAGATAA AGAAAACTACTGATGAATCATACAAGAAACTTAAAAACATAATCAATAGTACTTACAACTCTAACAGAGCAGATAAGTTT GTAACCTACTTTAATATAAGAACATTAGAAGAGCCTAATACAGTAAAAGATATTGCAACAGCATCAGATGTTACAGAAAA AACAATAATAAAGTGGGATAATACTCTCAAGGACAAAAGGATTTTATCAAAAGACGGTTATTACTACTTTAGATTATGCA AAGATACTAGAGAAGTACAACAATGCACTATAGAGGAATACAAGTCATTCTGGAAGAACAAAGCTTATATAAATGCTTTT TATCAACTCCAAAGCAAATACATGAATGGAGAAATAACACTTACAGAATTGCAGTTAGCTTCAGGAGAAATAGCTGTAAT AATAAGTACTATAGAAAATAAGTATTACTTCAAAGTTAAAAAATATAAAGTTAATAAGGAAAACCAATTATATATGGAAA CTAAGAATTTAATAGATGAAATAGAAAAGGGTACGAAATAG
Upstream 100 bases:
>100_bases TAAGGATAAGACAGTATCAGATAGAGTAACAAGTTTTGCTTCAGCAGCTATCAATCTAATGGCATCATATTTAGCTTATT ATGTTTTATTTATATAAGGT
Downstream 100 bases:
>100_bases GCTATAAACTACATGCTATAAATTAATACTTAACATGTAACTATAGGTTAAAAACGTACCCCTTTTTAATGTGAATAAAT CAATAAATTGATAGGAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MKCDRNKLKDILKVNLNTLKQIERRNNLQIRLRKVGYDLVDKHKEKNKYIYEIKKTTDESYKKLKNIINSTYNSNRADKF VTYFNIRTLEEPNTVKDIATASDVTEKTIIKWDNTLKDKRILSKDGYYYFRLCKDTREVQQCTIEEYKSFWKNKAYINAF YQLQSKYMNGEITLTELQLASGEIAVIISTIENKYYFKVKKYKVNKENQLYMETKNLIDEIEKGTK
Sequences:
>Translated_226_residues MKCDRNKLKDILKVNLNTLKQIERRNNLQIRLRKVGYDLVDKHKEKNKYIYEIKKTTDESYKKLKNIINSTYNSNRADKF VTYFNIRTLEEPNTVKDIATASDVTEKTIIKWDNTLKDKRILSKDGYYYFRLCKDTREVQQCTIEEYKSFWKNKAYINAF YQLQSKYMNGEITLTELQLASGEIAVIISTIENKYYFKVKKYKVNKENQLYMETKNLIDEIEKGTK >Mature_226_residues MKCDRNKLKDILKVNLNTLKQIERRNNLQIRLRKVGYDLVDKHKEKNKYIYEIKKTTDESYKKLKNIINSTYNSNRADKF VTYFNIRTLEEPNTVKDIATASDVTEKTIIKWDNTLKDKRILSKDGYYYFRLCKDTREVQQCTIEEYKSFWKNKAYINAF YQLQSKYMNGEITLTELQLASGEIAVIISTIENKYYFKVKKYKVNKENQLYMETKNLIDEIEKGTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27079; Mature: 27079
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCDRNKLKDILKVNLNTLKQIERRNNLQIRLRKVGYDLVDKHKEKNKYIYEIKKTTDES CCCCHHHHHHHHHHCHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCEEEEEECCCHHH YKKLKNIINSTYNSNRADKFVTYFNIRTLEEPNTVKDIATASDVTEKTIIKWDNTLKDKR HHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCHHHHH ILSKDGYYYFRLCKDTREVQQCTIEEYKSFWKNKAYINAFYQLQSKYMNGEITLTELQLA HHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEC SGEIAVIISTIENKYYFKVKKYKVNKENQLYMETKNLIDEIEKGTK CCCEEEEEEECCCCEEEEEEEEEECCCCEEEHHHHHHHHHHHCCCC >Mature Secondary Structure MKCDRNKLKDILKVNLNTLKQIERRNNLQIRLRKVGYDLVDKHKEKNKYIYEIKKTTDES CCCCHHHHHHHHHHCHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCEEEEEECCCHHH YKKLKNIINSTYNSNRADKFVTYFNIRTLEEPNTVKDIATASDVTEKTIIKWDNTLKDKR HHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCHHHHH ILSKDGYYYFRLCKDTREVQQCTIEEYKSFWKNKAYINAFYQLQSKYMNGEITLTELQLA HHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEC SGEIAVIISTIENKYYFKVKKYKVNKENQLYMETKNLIDEIEKGTK CCCEEEEEEECCCCEEEEEEEEEECCCCEEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA