| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934382
Identifier: 187934382
GI number: 187934382
Start: 3663013
End: 3663741
Strand: Reverse
Name: 187934382
Synonym: CLL_A3465
Alternate gene names: NA
Gene position: 3663741-3663013 (Counterclockwise)
Preceding gene: 187933371
Following gene: 187933419
Centisome position: 96.41
GC content: 27.85
Gene sequence:
>729_bases ATGATGAACAAGCTTAAATTTTTAGGAAGAGGCTCTGGTTATAATGTAAGAGAAGGAAATACAAGTGCGTATATTAATAA GAATAATATTCTTATTTTAATTGATTGTGGTGAAGGTGTTTTTAAAAGGATTATAGAAAGCAATCTTACCAATAATATAA AAGAAATTCATATACTTATTACACATATGCATGGTGATCATGTTGGCTCACTTAGCAGTTTTGTAGGGTTTTGTTTTTGG AAATATCATATATGTTGCAATGTATATTATCCAGAAAAGAGTAGGTTAAAGCAGTTTTTAGAACTAACAGGGATGCTTGA AGGCGAAAGTTTTATTATAAATGACAGTAATAGTGTAAGGATAGATAAATTAGGATTAGAATTCTCAGCATCACTAACTA AACATAATAAGAGAATTAACACGTATTCATATACATTAAAATTTGATGAAGAAAATGATATTTTTTATAGTAGTGATACT TATGAAACTAATTTTGATATGATACCATTTTTAAAAGAAGGCAATGTAGTCTATCATGATACTTGTCTAAGTGATGGTGA AGGCAATGTACACACTTCATTAAGAGTATTATGTGAAAAAGTTCCAAGAGAGCTAAGAAGTAATGTTTATTGTATACATA TTGATGGAGATAATTTTATTGAGATTGTTGAAAGAGAAGGTTTTAATGTACCACATATTTTAATTAAACAATTAAGTGTA GAGAGGTGA
Upstream 100 bases:
>100_bases TTTATAACTAAAGAATCTATTTACTTTATTATTGTAAGGTAATAAGATTATTATTGGAATTTATAAATAATACCAATAAT GTAATTTAAAAGGAGAAAAT
Downstream 100 bases:
>100_bases TTGAAATTAATAAGATAGATTTACATACTCATACAAATGTTTCCGATGGAGGTTAAACACCTAAAGAACTTATTGAAGAT GCTTTTAGGGAAAGTGTAAA
Product: metal-dependent hydrolase
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Beta-Lactamase Domain-Containing Protein; Metallobeta-Lactamase Superfamily Hydrolase
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MMNKLKFLGRGSGYNVREGNTSAYINKNNILILIDCGEGVFKRIIESNLTNNIKEIHILITHMHGDHVGSLSSFVGFCFW KYHICCNVYYPEKSRLKQFLELTGMLEGESFIINDSNSVRIDKLGLEFSASLTKHNKRINTYSYTLKFDEENDIFYSSDT YETNFDMIPFLKEGNVVYHDTCLSDGEGNVHTSLRVLCEKVPRELRSNVYCIHIDGDNFIEIVEREGFNVPHILIKQLSV ER
Sequences:
>Translated_242_residues MMNKLKFLGRGSGYNVREGNTSAYINKNNILILIDCGEGVFKRIIESNLTNNIKEIHILITHMHGDHVGSLSSFVGFCFW KYHICCNVYYPEKSRLKQFLELTGMLEGESFIINDSNSVRIDKLGLEFSASLTKHNKRINTYSYTLKFDEENDIFYSSDT YETNFDMIPFLKEGNVVYHDTCLSDGEGNVHTSLRVLCEKVPRELRSNVYCIHIDGDNFIEIVEREGFNVPHILIKQLSV ER >Mature_242_residues MMNKLKFLGRGSGYNVREGNTSAYINKNNILILIDCGEGVFKRIIESNLTNNIKEIHILITHMHGDHVGSLSSFVGFCFW KYHICCNVYYPEKSRLKQFLELTGMLEGESFIINDSNSVRIDKLGLEFSASLTKHNKRINTYSYTLKFDEENDIFYSSDT YETNFDMIPFLKEGNVVYHDTCLSDGEGNVHTSLRVLCEKVPRELRSNVYCIHIDGDNFIEIVEREGFNVPHILIKQLSV ER
Specific function: Unknown
COG id: COG1234
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27912; Mature: 27912
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNKLKFLGRGSGYNVREGNTSAYINKNNILILIDCGEGVFKRIIESNLTNNIKEIHILI CCCCEEEEECCCCCEECCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEEE THMHGDHVGSLSSFVGFCFWKYHICCNVYYPEKSRLKQFLELTGMLEGESFIINDSNSVR EEECCCCCCCHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCEE IDKLGLEFSASLTKHNKRINTYSYTLKFDEENDIFYSSDTYETNFDMIPFLKEGNVVYHD EEEECCEEEHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCEEEEEECCCEEEEE TCLSDGEGNVHTSLRVLCEKVPRELRSNVYCIHIDGDNFIEIVEREGFNVPHILIKQLSV EECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHCC ER CC >Mature Secondary Structure MMNKLKFLGRGSGYNVREGNTSAYINKNNILILIDCGEGVFKRIIESNLTNNIKEIHILI CCCCEEEEECCCCCEECCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEEE THMHGDHVGSLSSFVGFCFWKYHICCNVYYPEKSRLKQFLELTGMLEGESFIINDSNSVR EEECCCCCCCHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCEE IDKLGLEFSASLTKHNKRINTYSYTLKFDEENDIFYSSDTYETNFDMIPFLKEGNVVYHD EEEECCEEEHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCEEEEEECCCEEEEE TCLSDGEGNVHTSLRVLCEKVPRELRSNVYCIHIDGDNFIEIVEREGFNVPHILIKQLSV EECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHCC ER CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA